| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5754 |
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| Symbol | |
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| ID | 6128559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 2922948 |
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| End bp | 2924054 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641652839 |
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| Product | porin |
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| Protein accession | YP_001779366 |
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| Protein GI | 170738106 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.363123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGACTCA AATACTTCGC ATGGCTGATT GCGGCCGCCA CGCCGGCGGC TGCGTTTGCA
CAGACGAGCG TCACGCTGTA CGGCCGGATC GACGGCGGCG TCGAATACCT GAACCACATC
GCGAAGCCGA ACGGTGGCAG CGGGACGCGC TGGAGCGCGG AAAGCGGCGA CTGGGGCACC
AGCATGTTCG GGCTGAAGGG CGTCGAGGAT CTCGGCGGCG GCCTGTCGAC GGTGTTCAAC
CTGGAAACCG CGTTCCAGGT GATGAACGGC CAGACGGGCG GCGGGCGCAT GTGGTCACGG
CGCGCATACG TCGGGTTGAA GAGCAACACG TGGGGCCAAT TGCAGGCCGG CCGCAACCTG
TTCATCGACA GCGACGGCGT GTGGGAATTC GATCCGTTCG TCCAGCAGGC GTTTTCGTCG
GCGTCGCTCG TGCGTGGCCG CAACTGGCAG CAGACCAGCA ACAACATCGA ATATCACAGC
CCGGTGATCG GCGGCTTCGA CGTGCAGGCG CAATACGCGT TCGGCAACCA GTCGCGCGGC
TTCAACTACG GCGCGCCCGA CGATTTCGGC CGCTCGGACG GGATCATGAT CTCGTACCAC
TCGCCGGTGC TCGACGTGCG CGGCATCTAC GACGAGCTGC GCGACAACAA CGGCAAGTTC
AGCAACGTCT TCACGGCGTC GCGCGAGTAC TTCGTCGGTG CGAACGTGAA GGTGTCGAAG
TTCAAGATCC AGGGGGCGTA TACGCACTAC CAGGCGCCGG ATAGTCCGGC TGGTGTTGCC
GATCGTGCCG ATCACTACTG GCTCGGCGCA ACCTACTCGG CGACGCCGCA GTGGGCGGTG
ACGGGGGGCG GGTATTACGT GAAGGTCGGC GACGGCGGCG GCGATGCGTC GCACGATCCG
TCGGGGCACG CGATGATGTA CGTGCTCGGT ACCACGTACA ATCTGTCGAA ACGTACGTTC
CTGTATGGGA CGGTTGCGTA TGTGCGCAAC GGCGGGAATT CGAACTTCTC GCTGCTCGCG
ACGCCGCGGG ATGCGACGTC GGGGACGAGC CCGATGACAG GCGAGTCGCA GACGGGCGCG
TATGTGGGGA TGATGCATAC GTTCTGA
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| Protein sequence | MRLKYFAWLI AAATPAAAFA QTSVTLYGRI DGGVEYLNHI AKPNGGSGTR WSAESGDWGT
SMFGLKGVED LGGGLSTVFN LETAFQVMNG QTGGGRMWSR RAYVGLKSNT WGQLQAGRNL
FIDSDGVWEF DPFVQQAFSS ASLVRGRNWQ QTSNNIEYHS PVIGGFDVQA QYAFGNQSRG
FNYGAPDDFG RSDGIMISYH SPVLDVRGIY DELRDNNGKF SNVFTASREY FVGANVKVSK
FKIQGAYTHY QAPDSPAGVA DRADHYWLGA TYSATPQWAV TGGGYYVKVG DGGGDASHDP
SGHAMMYVLG TTYNLSKRTF LYGTVAYVRN GGNSNFSLLA TPRDATSGTS PMTGESQTGA
YVGMMHTF
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