| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5748 |
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| Symbol | |
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| ID | 6128553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 2910253 |
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| End bp | 2912496 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641652833 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_001779360 |
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| Protein GI | 170738100 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGATC TGGCTTTGCC GCGGCCGGCG CGTTTCGCCG GCCGCGTATT CGCCGCCGTC
GTGCTGGCCG CGCCGCTCGT CGCGCATGCG CTGCCCGGCT ACGACGACGT GCGCCGCAAC
TGGCGCAGCT CCGACTGGGT GCTGCTCGCG CGCGACGGCA CGCCGCTGCA GCGCACGCGT
GTCGACCTCG CCGAACGGCG CGGCGCCTGG GTGTCGCTCG CGGACGTATC GCCCGCGTTC
CGCGAAGCGA TCGTCGTGTC CGAGGACAAG CGCTTCTACG AACACAGCGG CGTCGACTGG
CGCGGCATCG CCGGCGCCGC GTGGGGCAAC CTGTGGAACG AGCGCACGCG CGGCGCGTCG
ACCGTCACGA TGCAGCTCGC GGGCCTGCTC GGCGATTCGC CGCGCCGCTC GGGCCAGCGC
TCGCTGCCGC AGAAGGCCAC GCAGGCCGTG AACGCGCTGT GGCTCGAACG CAGCTGGCGC
AAGGATCAGA TCCTCGAGGC CTATCTGAAC CTGGTGCCGT TTCGCGGCGA GACGATCGGG
CTCGGCGCGC TGTCGCAGGT GCTGTTCGGC AAGGCGCCGT CGGGCCTCGA CGCGCGCGAG
GCCGCGATCG CCGCCGCCCT CGTGCGGGCA CCCAACGCGG CCCCGGCGAA GATCGCCGAG
CGCGCATGCC GAATCCTGCG CGACATGCAG GCCGGGCAGG CGTGCGCGTC GCTCGACGGC
TACGTGCAGC TCGTCGTCGC GCGCCCAGCC AATACCGTAC GCGACGACGG CGCCGCACTC
GCCCCGCACT TCGCGCGGCG CATCGCGGCC GAGGTCAAGC CGGCGGCCGG CGCGCAGGTC
CGCACGACGC TCGATGCGCC GCTGCAGCGC TTCGCACGCG ACACGCTGAT GCGCGCGCTG
ACCGAACTGA ACGCGCCCGC GCACCGGCGC AACGTGCAGG ACGGCGCGGT CGTCGTGATC
GACAACGCGA CCGGCGAGAT CCGCGCATGG GTCGGCTCGT CGGGGGCGCT GTCGAGCGCG
CGCGACGTCG ATGCCGTGCT CGCGCCGCGC CAGGCCGGCT CGACGCTCAA GCCGTTCCTC
TATGCGCAGG CGCTCGACGA GAAGCGGCTG ACCGCCGCGT CGCTGCTCGA CGATGCGCCG
ATCAACCTCG CCGCCGGCGG CGGCCTGTAC ATTCCGCAGA ACTACGACAA GGATTTCAAG
GGCTGGGTGA GCGTGCGCAG CGCGCTCGGC GGCTCGCTGA ACGTGCCGGC CGTGCGCACG
CTGGTGCTCG TCACGCCGCA CCGTTTTGCG CGCACGCTGA CCGCGCTCGG CCTGCCGCTC
GCGCAGGAAG GCGATTACTA CGGTTTCAGC CTTGCGCTCG GCAGTGCGGA CGTCACACTG
CTGTCGCTGA CCAACGCCTA CCGCGCGCTC GCGAACGGCG GCGTCGCACG CAAGGTCGTC
GACCTGCCGG CCGCGGCACC GGCGCCCGCA TCCGGCGCAG CGGCGCCCGC GCGGCCGGAC
GCGGGCACGC GCGTGTTCAG CGAAGCGGCC AGCTTCGTCG TCACCGACAT CCTGTCCGAC
AACAATGCGC GTGTCCGTAC GTTCGGCTTC GACAACCCGC TCGCGACGCG CTTCTTCTCC
GCGGTCAAGA CCGGCACGAG CAAGGACATG CGCGACAACT GGACGGTGGG CTTCACGTCG
CGCTATACGG TCGGCGTGTG GGTCGGCAAT GCGGACGGCT CGCCGATGTG GGACGTGTCG
GGCGTCACGG GCGCGTCGCC CGTGTGGTCG GCCGTCGTCG GCTACCTGCA TCGCGACCTG
CCGAGCCGTG CGCCGCGCGC GCCGGCCGGC GTCGAGACGC GCCGGATCGC GTTCGAGCGC
GATATCGAGC CGGCTCGCAA CGAGTGGTTC ATCGCGGGCA CGGCGGTCGA CACGATCCGG
CTCGCGGCGC CCGTCACGCC GGGCAAGGAC GGCGCGCGCG CGCCGCTGAC GATCGGCGCG
CCGACCGACG GCACGATCTT TGCGATCGAC CCGGACATTC CGCCGAAGAA CCAGCGGATC
TGGTTCGAGC GCTCGGCCGG ACGCGCGACG AAGTTCGCGT GGCGGCTCGA CGACAAGGTG
ATCGGCCATG CCGATCGCGT CGCGTGGCTG CCGTGGCCGG GCCGGCACCG GCTCGAACTC
GTCGACGCGC GCGGCAACGT CGCGGATGCG ATCGGCTTCG AGGTGCGCGG CGCGTTCGCG
AAGCCGGCCG CGCGCAAGCG CTGA
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| Protein sequence | MIDLALPRPA RFAGRVFAAV VLAAPLVAHA LPGYDDVRRN WRSSDWVLLA RDGTPLQRTR
VDLAERRGAW VSLADVSPAF REAIVVSEDK RFYEHSGVDW RGIAGAAWGN LWNERTRGAS
TVTMQLAGLL GDSPRRSGQR SLPQKATQAV NALWLERSWR KDQILEAYLN LVPFRGETIG
LGALSQVLFG KAPSGLDARE AAIAAALVRA PNAAPAKIAE RACRILRDMQ AGQACASLDG
YVQLVVARPA NTVRDDGAAL APHFARRIAA EVKPAAGAQV RTTLDAPLQR FARDTLMRAL
TELNAPAHRR NVQDGAVVVI DNATGEIRAW VGSSGALSSA RDVDAVLAPR QAGSTLKPFL
YAQALDEKRL TAASLLDDAP INLAAGGGLY IPQNYDKDFK GWVSVRSALG GSLNVPAVRT
LVLVTPHRFA RTLTALGLPL AQEGDYYGFS LALGSADVTL LSLTNAYRAL ANGGVARKVV
DLPAAAPAPA SGAAAPARPD AGTRVFSEAA SFVVTDILSD NNARVRTFGF DNPLATRFFS
AVKTGTSKDM RDNWTVGFTS RYTVGVWVGN ADGSPMWDVS GVTGASPVWS AVVGYLHRDL
PSRAPRAPAG VETRRIAFER DIEPARNEWF IAGTAVDTIR LAAPVTPGKD GARAPLTIGA
PTDGTIFAID PDIPPKNQRI WFERSAGRAT KFAWRLDDKV IGHADRVAWL PWPGRHRLEL
VDARGNVADA IGFEVRGAFA KPAARKR
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