Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5728 |
Symbol | |
ID | 6128533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 2888836 |
End bp | 2890077 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641652813 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_001779340 |
Protein GI | 170738080 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.934424 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGA ACGAATCCTG GTTTGCGCCG CTCGTCGGCA TCCTCGTCCT GCTCGCCGCC GCCGGCGCGA TCACCGCCGT CGTCCACTTC CTGCTGTTTC GCGTGGTCGC GCGGCTCGCG CGGCTGTCCG CCACGCGCGT CGACGACGCG CTGTTCGAAT TCGGCGCCTT CAAATGGCTG AACCGCATCG TCCCGTTCGT CGTGATCAAG CTCGGGCTCG GCGCGGTGTC CGGCATTCCC GGCCTGGTCG CGCAGGTGGT CGACAAGGTG CTGTTCGCGC TGATCGTGTT CCTCGTGACG ATGACCATCA GCGCGACGCT GTCCGCGCTC GAACACACGC ACCGCACCGC GCAACGCGAT CAGCCGCGTC TGTCGCTGAA AGGCGCGATG CAGCTGGTCA AGCTCGTGAT GTTCATCACG GCCGCGCTCG TCGTGATCGG CGATGCGACC GGCAAGCAGA TCGGCCTGCT GCTGTCCGGC ATCGGTGCGA TGTCCGCGGT GCTGATGCTG ATCTTCAAGG ACACGCTGCT CGGCCTCGTC GCCGGCGTAC AGCTGTCGTC GAACGACATG CTGCGGATCG GCGACTGGAT CACGATGCCG TCGGCCGGCG CGGACGGCAC GGTCATCGAC ATCACGCTGA ACACCGTCAA GGTCGCGAAC TTCGATCACA CGATCATCAC GGTGCCGACC TGGAAACTGA TCACCGAGAG CTACCAGAAC TGGCGCGGCA TGACCGAAGC GGGCGGTCGC CGCATCAAGC GCGCGCTGTT CATCGATGCG ACGAGCGTGC GCTTTCTCAC GAACGACGAG ATCGAACGGC TCGAACGCCT GACGCTGCTG AAGGACTATC TCGAAGACAA GGTCGACGCG ATCGAGCAAT GGAACGGCAC GCTCGGCGCG GCCGGCGAGT GCCCGGCGAA CCGCCGCCAG CTGACGAATC TCGGCACGTT CCGCGCGTAC GTCGCGAACT ACCTGAAGGG CCATCCGCGC ATTCGCCGCG ACATGACGAA CATGGCGCGG CAACTGCCGC TCACGGCCGA AGGCATTCCG CTCGAACTGT ACTGCTTCAC CGACACGACG ACGTGGGTCG ACTACGAGAC CATCCAGGCC GACCTGTTCG ACCACCTGAT CGCGGTGCTG CCGGAGTTCG GGCTGCGCGT GTACCAGCAT CCGTCGGGCT TCGACATGCG CCAGATGGTC GACGCCGCGC AGCCCGGGTT GCAGGCGCCG CGCGCGGCGT GA
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Protein sequence | MTLNESWFAP LVGILVLLAA AGAITAVVHF LLFRVVARLA RLSATRVDDA LFEFGAFKWL NRIVPFVVIK LGLGAVSGIP GLVAQVVDKV LFALIVFLVT MTISATLSAL EHTHRTAQRD QPRLSLKGAM QLVKLVMFIT AALVVIGDAT GKQIGLLLSG IGAMSAVLML IFKDTLLGLV AGVQLSSNDM LRIGDWITMP SAGADGTVID ITLNTVKVAN FDHTIITVPT WKLITESYQN WRGMTEAGGR RIKRALFIDA TSVRFLTNDE IERLERLTLL KDYLEDKVDA IEQWNGTLGA AGECPANRRQ LTNLGTFRAY VANYLKGHPR IRRDMTNMAR QLPLTAEGIP LELYCFTDTT TWVDYETIQA DLFDHLIAVL PEFGLRVYQH PSGFDMRQMV DAAQPGLQAP RAA
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