Gene Bcenmc03_5723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5723 
Symbol 
ID6128528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2880842 
End bp2881753 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content69% 
IMG OID641652808 
ProductLysR family transcriptional regulator 
Protein accessionYP_001779335 
Protein GI170738075 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.210573 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTCG AGAGCATCCG GATATTCCTG CGCGTGGTGG AGCGCGGCAA TTTCACCGCC 
GCCGCCACGC AACTCGACAT GCCGCTCAGC CGCGTGAGCC GCAAGATCAA GCAGCTCGAG
GAGGACCTCG GCGTCCAGCT GCTGTACCGC ACGACGCGCC GCGTATCGGT CACCGAAGCC
GGGCGCGACT ATTACGAACG CTGCCTGCGC GCCGAGGAGA TCCTGCTCGA CGCGGACCGT
CAGGTGCGCG CGCTGCGCAC GGAACCCGAA GGCACGCTGC GCGTGCTGGT GCCCTACGCG
ATCGGCCTGT TCGAACTGGA GCCGGCGCTC GCCGAGTTTC GCCGGCGCTA CCCCCTGGTC
CAGCTCGTGC TGATCTACGA CAACAGCGCG CTCGACCTCG TCGAACACGG CTTCGACGTC
GCGCTGCGCA CCGGCGTGCT GAGCGATTCC GGCTATGTCG CGCGCTCGCT CGGCTGGTCG
CACGCGAAGT TCGCGGCCAG CCCGCACTAT CTCGACCGCG CGGGCCGGCC GCGCACGCCG
CAGGACCTCG CCGATCACGA CATCCTGTTC GTCGGCCGCG ACACGCCGGG CCTGACGCTG
CGCCTCACCA ACGCCGCCGG CGACGTCGCC GACGTGCCGG TGCGGCCCGT GCTGATCTCG
AACGAATCGG TCACGGTGCT GCGCCAGGCA GCGAGCGGCG GCGGCATCGC ACTGATTTCG
ACCCACTTCA CCACCCGGCG GCTCGAGAGC AACGAACTCG AAATCGTGCT GCCCGACTGG
CATCGCACCG ACGACGTCGA GCTGCACGCG CTCTACCCGA AGCGCGCGAC GCTCGACAGC
AAGGTGCGCG CGTTCGTCGA GTTCCTGACG GAAGTCTTCA CCGCGTGGCG GACCGCGTCG
CAGAGCCTGT AA
 
Protein sequence
MDLESIRIFL RVVERGNFTA AATQLDMPLS RVSRKIKQLE EDLGVQLLYR TTRRVSVTEA 
GRDYYERCLR AEEILLDADR QVRALRTEPE GTLRVLVPYA IGLFELEPAL AEFRRRYPLV
QLVLIYDNSA LDLVEHGFDV ALRTGVLSDS GYVARSLGWS HAKFAASPHY LDRAGRPRTP
QDLADHDILF VGRDTPGLTL RLTNAAGDVA DVPVRPVLIS NESVTVLRQA ASGGGIALIS
THFTTRRLES NELEIVLPDW HRTDDVELHA LYPKRATLDS KVRAFVEFLT EVFTAWRTAS
QSL