Gene Bcenmc03_5720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5720 
Symbol 
ID6128525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2876546 
End bp2878135 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content66% 
IMG OID641652805 
Productextracellular solute-binding protein 
Protein accessionYP_001779332 
Protein GI170738072 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.174819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.308845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACC TGCTGTCCCG GCTGTTCGTC AGCGCCGCGC TCGTCGCGCT TGTTCCGGCG 
CTGCCGGCGC AGGCTGCCAC GCCGCCCGGC ATCTTCGTCG TCGCCACGCA GCTCGGCGAA
TTCACGACCC TCGACCCGAG CGGGATCTAC GAGCTGGTGC CGTCCGAATA CGTCGCGAAC
ACCTACGAAC GGCTGGTGCG CGTCGACCTG AAGGACCCGA CGCGCTTCGA CGGACAGATC
GCGCAATCGT GGACGGTCGG CGCCGACGGC GTGACCTACA CGTTCAAGCT GCGCCCGGGC
CTCACGTTCC ATTCCGGCAA TCCGGTCACC GCCGACGACG TCGCGTGGTC GCTGCAGCGC
ACCATCCTGC TCGACAAGGG GCCGGCCGGC GTGCTCGCCG ATCTCGGCCT CACGAAGGCG
AACGTCACGC AGAAGGTGCG CGTGGTCGAT CCGCAAACCG TCGTGCTCGA AACCGACCGC
AAGTACGCGC CGAGCTTCGT GCTCAACGTG CTGAGCGCGT GCCCGGCCTC GGTCTTCGAC
AAGAAGCTGC TGCTGTCGCA CCAGCAAGGC AACGATTTCG GCAGCGGCTG GCTGCGCACC
AACGACGCGG GCTCGGGCCC GTACCAGCTC GTCAAGTGGA CGCCGAACGA AACCATCGTG
CTGCAGCGCT TCGACAAATA CCGCACGCCG TATCCGATGA AGCGCGTGGT GCTGCGCCAC
GTGCCCGAAG CCTCCGCGCA ACGGCTGCTG CTGGAGAACG GCGACGCCGA CGCCGCGCGC
AACCTGAGCC CCGACAGCCT CGCCGCGCTG TCGAAGGCCG GCAAGATCAA GGTCGCGTCG
TGGCCGGTGT CGGCGCTGCT GTACCTGAGC CTGAACACGA AGAACCCAAA CCTCGCGAAG
CCCGAGGTGC AGCAGGCGAT GAAATGGCTC GTCGACTACG ACGGCATCCA GCGCAACATC
GTCAGCACGA CCTACAAGGT GCATCAGACC TTCCTGCCCG AAGGCTTCCT CGGCGCGTCG
AACGCGCGGC CGTACAAGCA GGACGTCGCG AAGGCGAAGG CGCTGCTCGC GAAGGCCGGC
TTGCCGAACG GCTTCGACGT GACGATGGAC ATGCCGAACG ACTATCCGTA CCTCGAGATC
GCGCAGGCGC TGCAAGCGAA CTTCGCGCAG GGCGGCATCC GCGTGAAGCT GATCCCGGGC
GACGCGAAGC AGGCGATCGG CAAGTACCGC GCCCGCCAGC ACGACATCTT CGTCGGCGAA
TGGTCGCCCG ACTACATGGA CCCGAACAGC AACGCGCGTG GTTTTGCGTG GAATCCGGAC
AACTCGGACC AGTCGCCGAC CAAGATGCTC GCGTGGCGCA ACAGCTGGGA CATTCCGCAA
CTGACGAAGG ACACCGAGGC CGCGCTCGTC GAGCCGTCGC CTGCGAAGCG CGCGCAGCGT
TACGAAGCGC TGCAGAAGGC CGTGCTCGCG AACTCGCCGT TCATCATCAT GTTCGAGAAG
GTCGTGCAGG TCGCCACGCG CCCCGGCGCG ACCGGGCCGG AAATCGGGCC GATCAACGAT
CTCGTGTCAT ACCGCACGCT CGCGAAGTAA
 
Protein sequence
MKHLLSRLFV SAALVALVPA LPAQAATPPG IFVVATQLGE FTTLDPSGIY ELVPSEYVAN 
TYERLVRVDL KDPTRFDGQI AQSWTVGADG VTYTFKLRPG LTFHSGNPVT ADDVAWSLQR
TILLDKGPAG VLADLGLTKA NVTQKVRVVD PQTVVLETDR KYAPSFVLNV LSACPASVFD
KKLLLSHQQG NDFGSGWLRT NDAGSGPYQL VKWTPNETIV LQRFDKYRTP YPMKRVVLRH
VPEASAQRLL LENGDADAAR NLSPDSLAAL SKAGKIKVAS WPVSALLYLS LNTKNPNLAK
PEVQQAMKWL VDYDGIQRNI VSTTYKVHQT FLPEGFLGAS NARPYKQDVA KAKALLAKAG
LPNGFDVTMD MPNDYPYLEI AQALQANFAQ GGIRVKLIPG DAKQAIGKYR ARQHDIFVGE
WSPDYMDPNS NARGFAWNPD NSDQSPTKML AWRNSWDIPQ LTKDTEAALV EPSPAKRAQR
YEALQKAVLA NSPFIIMFEK VVQVATRPGA TGPEIGPIND LVSYRTLAK