Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5720 |
Symbol | |
ID | 6128525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 2876546 |
End bp | 2878135 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641652805 |
Product | extracellular solute-binding protein |
Protein accession | YP_001779332 |
Protein GI | 170738072 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.174819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.308845 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACC TGCTGTCCCG GCTGTTCGTC AGCGCCGCGC TCGTCGCGCT TGTTCCGGCG CTGCCGGCGC AGGCTGCCAC GCCGCCCGGC ATCTTCGTCG TCGCCACGCA GCTCGGCGAA TTCACGACCC TCGACCCGAG CGGGATCTAC GAGCTGGTGC CGTCCGAATA CGTCGCGAAC ACCTACGAAC GGCTGGTGCG CGTCGACCTG AAGGACCCGA CGCGCTTCGA CGGACAGATC GCGCAATCGT GGACGGTCGG CGCCGACGGC GTGACCTACA CGTTCAAGCT GCGCCCGGGC CTCACGTTCC ATTCCGGCAA TCCGGTCACC GCCGACGACG TCGCGTGGTC GCTGCAGCGC ACCATCCTGC TCGACAAGGG GCCGGCCGGC GTGCTCGCCG ATCTCGGCCT CACGAAGGCG AACGTCACGC AGAAGGTGCG CGTGGTCGAT CCGCAAACCG TCGTGCTCGA AACCGACCGC AAGTACGCGC CGAGCTTCGT GCTCAACGTG CTGAGCGCGT GCCCGGCCTC GGTCTTCGAC AAGAAGCTGC TGCTGTCGCA CCAGCAAGGC AACGATTTCG GCAGCGGCTG GCTGCGCACC AACGACGCGG GCTCGGGCCC GTACCAGCTC GTCAAGTGGA CGCCGAACGA AACCATCGTG CTGCAGCGCT TCGACAAATA CCGCACGCCG TATCCGATGA AGCGCGTGGT GCTGCGCCAC GTGCCCGAAG CCTCCGCGCA ACGGCTGCTG CTGGAGAACG GCGACGCCGA CGCCGCGCGC AACCTGAGCC CCGACAGCCT CGCCGCGCTG TCGAAGGCCG GCAAGATCAA GGTCGCGTCG TGGCCGGTGT CGGCGCTGCT GTACCTGAGC CTGAACACGA AGAACCCAAA CCTCGCGAAG CCCGAGGTGC AGCAGGCGAT GAAATGGCTC GTCGACTACG ACGGCATCCA GCGCAACATC GTCAGCACGA CCTACAAGGT GCATCAGACC TTCCTGCCCG AAGGCTTCCT CGGCGCGTCG AACGCGCGGC CGTACAAGCA GGACGTCGCG AAGGCGAAGG CGCTGCTCGC GAAGGCCGGC TTGCCGAACG GCTTCGACGT GACGATGGAC ATGCCGAACG ACTATCCGTA CCTCGAGATC GCGCAGGCGC TGCAAGCGAA CTTCGCGCAG GGCGGCATCC GCGTGAAGCT GATCCCGGGC GACGCGAAGC AGGCGATCGG CAAGTACCGC GCCCGCCAGC ACGACATCTT CGTCGGCGAA TGGTCGCCCG ACTACATGGA CCCGAACAGC AACGCGCGTG GTTTTGCGTG GAATCCGGAC AACTCGGACC AGTCGCCGAC CAAGATGCTC GCGTGGCGCA ACAGCTGGGA CATTCCGCAA CTGACGAAGG ACACCGAGGC CGCGCTCGTC GAGCCGTCGC CTGCGAAGCG CGCGCAGCGT TACGAAGCGC TGCAGAAGGC CGTGCTCGCG AACTCGCCGT TCATCATCAT GTTCGAGAAG GTCGTGCAGG TCGCCACGCG CCCCGGCGCG ACCGGGCCGG AAATCGGGCC GATCAACGAT CTCGTGTCAT ACCGCACGCT CGCGAAGTAA
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Protein sequence | MKHLLSRLFV SAALVALVPA LPAQAATPPG IFVVATQLGE FTTLDPSGIY ELVPSEYVAN TYERLVRVDL KDPTRFDGQI AQSWTVGADG VTYTFKLRPG LTFHSGNPVT ADDVAWSLQR TILLDKGPAG VLADLGLTKA NVTQKVRVVD PQTVVLETDR KYAPSFVLNV LSACPASVFD KKLLLSHQQG NDFGSGWLRT NDAGSGPYQL VKWTPNETIV LQRFDKYRTP YPMKRVVLRH VPEASAQRLL LENGDADAAR NLSPDSLAAL SKAGKIKVAS WPVSALLYLS LNTKNPNLAK PEVQQAMKWL VDYDGIQRNI VSTTYKVHQT FLPEGFLGAS NARPYKQDVA KAKALLAKAG LPNGFDVTMD MPNDYPYLEI AQALQANFAQ GGIRVKLIPG DAKQAIGKYR ARQHDIFVGE WSPDYMDPNS NARGFAWNPD NSDQSPTKML AWRNSWDIPQ LTKDTEAALV EPSPAKRAQR YEALQKAVLA NSPFIIMFEK VVQVATRPGA TGPEIGPIND LVSYRTLAK
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