Gene Bcenmc03_5698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5698 
Symbol 
ID6128503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2853648 
End bp2854559 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content70% 
IMG OID641652783 
ProductLysR family transcriptional regulator 
Protein accessionYP_001779310 
Protein GI170738050 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00167817 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACCATC TGCAAGCAAT GCGCACCTTC GCGCGCGTCG CCCATCTGGG CAGCTTCACG 
AAAGCGGCCG AGCAACTCCA GTTGCCGCGC CCGACGGTCA GCAACGCCGT CCAGTATCTG
GAAAAGCACC TGAAGATCCG CCTGCTGCAA CGCACGACGC GGCGCGTCGC GCTGACCGCC
GAGGGCGCGA CCTACTACGA GCGCTGCGTG CGGTTGCTGG CCGATCTCGA CGATGTGGAA
ACGCTGTTCG AGGATGCCGG CGCGTCGCCG CGCGGCGTGA TCCGCGTCGA CCTGCCCGAG
CGTTTCGCGC TGAACCAGGT GATTCCGGCG CTGCCGGATT TCCACGCGCG CTACCCCGAC
CTGCGCGTCG TGATCAGCAC GACCGACCGC TTCGTCGACC TCGTGGCCGA CGGCATCGAT
TGCGCGGTGC GGGTCGGCGT GCTGTCCGAC ACGTCGCTCG TCGCGCGGCG CGTCGGCGAG
ATGGCCCAGA TCAACTGCGC GTCGCCCGCC TATCTCGCGC GCCACGGCAC GCCGCGCTCG
CCGGACGAGC TGCCGGACCA CGTCGCGGTC GGTTATTTCT CGAGCCGAAC GGGCCGCGAG
CTGGACTGGG AATATGCGGA CATGGATTCG GGCGAGCTGC ACGCGGTGAA GATGCACAGC
GTCGTGTCGG TCAACAGCTC GCAGGCGTAT CTCGCGTGCT GCCTCGCGGG CCTCGGGCTG
ATCCAGGCGC CGCGCGACGG GCTCGCGCCG CTGCTCGCCG ACGGCTCGCT GGTCGAGGTG
CTGCCGGAAT GGAATGCGGC GCCGCTGCCC GTGTCGGTGG TGTTCCCGAC CGGCCGGCAT
CTCGCGCCGC GCGTGCGGAT CTTCGTCGAC TGGCTCGCGG AAACGCTCGG CGGCATGCAC
CGGGCGGACT GA
 
Protein sequence
MDHLQAMRTF ARVAHLGSFT KAAEQLQLPR PTVSNAVQYL EKHLKIRLLQ RTTRRVALTA 
EGATYYERCV RLLADLDDVE TLFEDAGASP RGVIRVDLPE RFALNQVIPA LPDFHARYPD
LRVVISTTDR FVDLVADGID CAVRVGVLSD TSLVARRVGE MAQINCASPA YLARHGTPRS
PDELPDHVAV GYFSSRTGRE LDWEYADMDS GELHAVKMHS VVSVNSSQAY LACCLAGLGL
IQAPRDGLAP LLADGSLVEV LPEWNAAPLP VSVVFPTGRH LAPRVRIFVD WLAETLGGMH
RAD