| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5697 |
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| Symbol | |
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| ID | 6128502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 2852450 |
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| End bp | 2853604 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641652782 |
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| Product | porin |
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| Protein accession | YP_001779309 |
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| Protein GI | 170738049 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00705206 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCACC CCGTCATTTT TGCCGCCGCG CTCGCTGCCT TCGCCGCGCC GGCCTTTGCC
GAGACCAGCG TGACGCTGTA CGGCGTGATC GACGAAGGCT TCAATTACAC GAACAACGTC
AACGTCAATG GGGTCGGAAA GACCAATTAC CAGCTCGCGA GCGGCTATGC GCAGGGCAGC
CGCTGGGGCC TGAAGGGCAC CGAGGATCTC GGCGGCGGGC TGAAGGCGGT CTTCACGCTG
GAAAACGGTT TCGACGTGAA TAACGGCCGG CTCGGCCAGG GCGGCCGCAT GTTCGGCCGT
CAGGCGTTCG TCGGGCTGTC CGAGTCGCGC TTCGGCACGC TGACCTTCGG CCGCCAGTAC
GATGCGGTCG TCGACTATCT CGCGCCGCTG ACCGCGAACG GCAACTGGGG CGGCACGCTG
TTCTCGCACC CGTTCGACAA CGACAACACG GACAACTCGT TCCGCGTCAA CAACACGGTC
AAGTACGCGA GCGCCGACTG GAACGGCCTG ACGTTCGGCG GCACGTACAG CTTCAGCAAC
AGCACGGGCT TCTCGAACAA CCGCCAGTAC AGCATCGGCG CGCAGTATTC GCTGGCCGGG
CTGCAGGTCG CGGCCGCGTA CCTGCAGGCG AACAACCCGG GCATCGGCAG CGCGGGCGCG
ATCGCGGCCG ACGACGCGAA CTTCGTCGCC GACCGGCTGC GCATCTTCGG CGGCGGCGTC
AATTACACGT TCGGCCCGGC GACGGTCGGC GTCGTCTACA CGAAGACCGA CGTGAAGAAC
CCGGTATCGA CGGTCTACCT GCCGGCGTCG ACGTTCGCCG GTCTCGGGCT GACCGCGACG
AAGTTCCAGA ACTTCGAAAT CAACGGCAAG TACCAGCTCA CGCCCGATTT CTATCTCGGT
GCGCAATACG TATACACGGA CGGCAAGTAC GATGCGGCGG CCGGTTCGTT CAAGCCGAAG
TACCACACGG TCGGCCTGAT GGCCGACTAC AGCCTGTCGA AGCGCACCGA CGTGTACCTG
CAGGGCGCGT GGCAGAAGGT GGGCGGCGAC AAGACGGGCA CGGCGGCCGA CGGCGGCTAT
GTCGTCGGGA CGGACGGCCC GTCGGCGTCG TCGAACCAGT TCTCGGTGCG CGCCGCGATT
CGCCACAAGT TCTGA
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| Protein sequence | MKHPVIFAAA LAAFAAPAFA ETSVTLYGVI DEGFNYTNNV NVNGVGKTNY QLASGYAQGS
RWGLKGTEDL GGGLKAVFTL ENGFDVNNGR LGQGGRMFGR QAFVGLSESR FGTLTFGRQY
DAVVDYLAPL TANGNWGGTL FSHPFDNDNT DNSFRVNNTV KYASADWNGL TFGGTYSFSN
STGFSNNRQY SIGAQYSLAG LQVAAAYLQA NNPGIGSAGA IAADDANFVA DRLRIFGGGV
NYTFGPATVG VVYTKTDVKN PVSTVYLPAS TFAGLGLTAT KFQNFEINGK YQLTPDFYLG
AQYVYTDGKY DAAAGSFKPK YHTVGLMADY SLSKRTDVYL QGAWQKVGGD KTGTAADGGY
VVGTDGPSAS SNQFSVRAAI RHKF
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