| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5684 |
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| Symbol | |
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| ID | 6128489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 2835615 |
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| End bp | 2836790 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641652769 |
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| Product | porin |
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| Protein accession | YP_001779296 |
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| Protein GI | 170738036 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.101118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAT ATCTGGCAAT TCCGGCGGCG GTCGCCTGCC TGCTGGCGAG CGCGGCGCAT
GCGCAGAGCA GCGTGACGCT GTACGGCACG ATCGACGCGG GCCTGGACTA CATCAGCAAC
CAGAAATCGG CCGCGGGCGC GGGGCCCGTC TACGGTGTCC AGAGCGGCAA CGTCAGCACG
TCGCGCTGGG GGCTGCGCGG CAACGAGGAT CTCGGCGGGG GCCTGGCCGC CGTGTTCACC
CTCGAGAACG GCTTCAACGT CGCGAACGGC AAGCTCGGCA ACGGCGGCGA CGAATTCGGC
CGCCAGGCGT GGGTTGGCCT CGCGAGCCGC CAGTGGGGTA CGGTGACGCT CGGCCGCCAG
TACGATTTCC TGGTCGACTT CGTCGCGCCG CTGTCGGCGA CGGGGTCCGG ATTCGGCGGC
AACCTCGCCG ATCATCCGTA CGACAACGAC AACCTCGCCA ACGACACGCG GATGAACAAC
GCGGTGAAGT TCCGCAGTGC GAACTACGGC GGCTTCACGT TCGGCGGTGC GTACGGCTTC
AGCAATCAAG GCGGCGGATT CAGCAACGAC AACGCGTACA GCGTCGGCGC GCAGTACGTG
AACGGCCCGG TCGACCTCGC CGTCGCGTAC CTGCAGTCGA ACCAGCCGGG CGGTGTCGAC
GCGCCGCAGA ACACCGGCGG GTCGCTGAGC AGCGCCGACG GCGATGCGAT GCTGACCGGC
GGCCGCTGGC GCACGTTCGG CGCCGGCGCG CACTATGCGT TCGACCATGC CGCGATCGGC
TTCGTCTACA CCAGAACGAT CCTGAACGAC CCGCGCGAGC TGTCGCAGGG TGGCGCATAC
GGCCGCGTGA ATGGGCAGTT GCTGACCTTC AGCAACTACG AACTGAACGG GCGCTACTTC
CTCACGCCGG CCTTCTCGCT GGGCGGCGCC TATACGTTCA CGCAGGGCCG CTTCGACGAT
GCGGACCACG GCATCGCGCC GAAGTGGAAC CAGTTCATGC TGCAGGCCGA CTATGCGTTG
TCACGCCGCA CCGACCTCTA TCTGGAAGGC GTGTATCAGC GCGTGACGGG CGCGGACGGC
GTCGCGGTGC TCGGCCACGC GGGGATCTTC AACCTTGCCG CGTCAGGCAA CGATCGTCAG
GCCGTCGTCG CGGCCGGTAT CCGTCACAAG TTCTGA
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| Protein sequence | MKKYLAIPAA VACLLASAAH AQSSVTLYGT IDAGLDYISN QKSAAGAGPV YGVQSGNVST
SRWGLRGNED LGGGLAAVFT LENGFNVANG KLGNGGDEFG RQAWVGLASR QWGTVTLGRQ
YDFLVDFVAP LSATGSGFGG NLADHPYDND NLANDTRMNN AVKFRSANYG GFTFGGAYGF
SNQGGGFSND NAYSVGAQYV NGPVDLAVAY LQSNQPGGVD APQNTGGSLS SADGDAMLTG
GRWRTFGAGA HYAFDHAAIG FVYTRTILND PRELSQGGAY GRVNGQLLTF SNYELNGRYF
LTPAFSLGGA YTFTQGRFDD ADHGIAPKWN QFMLQADYAL SRRTDLYLEG VYQRVTGADG
VAVLGHAGIF NLAASGNDRQ AVVAAGIRHK F
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