| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5662 |
|---|
| Symbol | |
|---|
| ID | 6128467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 2810248 |
|---|
| End bp | 2812263 |
|---|
| Gene Length | 2016 bp |
|---|
| Protein Length | 671 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641652747 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001779274 |
|---|
| Protein GI | 170738014 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1289] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.946498 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCG TGGCCGGCAT GCCGGCCGGA AGCCGCCGCG CTGTCTCCTG GAATTCCTCG
ATCATGTCAG CTGTTTCGTT GTCACGGGCG ATTGACCGCC TGTTCATTGT CGACCCTGGT
CTTCATCGTC TGCTGGGCGG TGCGCGCGCC GCGCTGGCGA GCGTGCTGGC CGGTGCGCTC
GGCATTGCGT CGGCGCTCCA TCTCGGTTTT GCGATCACCA CCGGCGCGGT GGGCATCCTG
TTCTCGATGA TCGCGCCACT CTTCCTGCGC GATGCTCTCC GGCTGGACTG GTATGAGTCG
CTTGCGTGGC AGTACGGCAT CGCATGCGCA AGCTTTGCCG CAGCTGCCTG CGTGAGTGCG
TGGCCGGCCG TCGGCAAGGC GGGGTTCGTG ATCGTCCTGT TCTGTTCGAT GCTGTGCCAG
ACCCGCGGGC CGCGCACGAT CGGCTGTGCG TTCCTGGCGA TCGCCATGTA CTACCTCGGT
CTTTATCTGC ATCCGGCCGC GCTACAGGCC GGCCACATGC TGGCGATGTC GATCGCCGGC
CCGGCAAGCG TCGTGCTCGT CTGCCGCGTG CTGCTGCCGG TGCACGCGGC GCCCACGCCA
CGGCTCATCG CGCGCTCGGT ATCGCTGCAC GCGGCGTGCA TCGCACGAAG CGACGTGTCG
GATGCCGGCG CGCTGGATGC GATGGCCCAT TTACTGGCGC TGAACGAAGC CGCCATCGCG
CTCGAGCATC ACGCGTCGAC ACGCGATGAA GGCGGCGCGC ATGCGTTGCA CACCGCGCTC
GTCGCATTGG AGATCGCGTC GGCTCGACGC GTGCTGAACC GCGATCGAAC CGATGCCGCC
GTCGCAGGCC TACGTGCTGC GATTGCCCGC TTCGAGAGCG TCGCCGACGG CCTGGCGGCG
CGCATCACCG CCGCACCGCC GCCCGCGCTG CCGCGGCCCG CGCGCGCGGT GCCGTGGACC
GCCGGCTGGC GCACGCTTGC ATGGTTGCCG GCGATCCGCG CGGCGGCGGC TGCGTGCGCC
GCGATGTTGA TCGGCGAGAC GCTGTCGTCG GAACGGTGGA TGTGGGCGGT GCTCAGCACG
TTCGTCGTGT TCTTCGGCAC GTACTCGTGC GCGGACACCA TCTATCGCGG CGCGCAACGC
GTCGCCGGGA CGCTCGCCGG CGCGCTCGCG AGCGTACTCG TCGTCGGCGC GGCTCATCAT
GCGAATGCAC TCGTGGTCAT CGTCATGGGC GTGTGCGTGT TTGGCTGGGC GTACCATATC
CTGCACGCCT ATGGGCGCGG CGTGTTCTTT CTCACGGTGC TGATCGGCCT CGTCTATGCG
CAACTGGGGT TCGAGATCGG CGCGCTTGCG GAACTGCGTA TCGGCGAGGT GTTGATCGGC
TGCGCGGTGT CGCTCGCGGC GGCGCTGCTG GTGATGCCGC TGGCGGCGTC GCGCCACATT
GCGACGCGCT CGCACGGGCT GTTGGCGGCG CTGCGCGAAC TCGTGCACGA CCGCGACGAC
GGCATACGGC CGGGGGCGGC GCAGATGCGC GCGGCCGATC GTCGCTTTCA CGACGTGCGC
ATGGCGATCC GGCCGTTGGC TGCGTGGCGT ATGCTCCGTG CGTCGGGCGA CGCCCGACGG
TTGTCGGACA CGTTGCTGTC CTGCTGGCTG TATGGCCGAA TCGTGGCGAC ACGCCTGCCG
GTCGAAGCCG GTGGCCCGGA TGTCGCATTC GAGCGGCCGG CGCGCGCGGC TGTCGTCACG
CGAATCGATG CGTTGATCAG CGATCTGGAT CACGGCCGGT CGATGCGACT CGATGCGGCT
GCGAGCGTCG GGCACGGAAC GCTTGCGGTA GCCGGCGATC CTTCGTTACC GGCCCATCGG
GAACTGGCGC GGCTCGACGC GAAGTTGACC GAACTCAACC GCGCATTCGA GGACGCGCTG
TTCGGAAAAA ATACGGGCGA GGAACGGTCG CATCGCGCCG ATGGCAGCGC TCTCGCCCCC
GATGTTCGGG AAGCGATACG TTGTTCAGGT ATCTGA
|
|---|
| Protein sequence | MKAVAGMPAG SRRAVSWNSS IMSAVSLSRA IDRLFIVDPG LHRLLGGARA ALASVLAGAL
GIASALHLGF AITTGAVGIL FSMIAPLFLR DALRLDWYES LAWQYGIACA SFAAAACVSA
WPAVGKAGFV IVLFCSMLCQ TRGPRTIGCA FLAIAMYYLG LYLHPAALQA GHMLAMSIAG
PASVVLVCRV LLPVHAAPTP RLIARSVSLH AACIARSDVS DAGALDAMAH LLALNEAAIA
LEHHASTRDE GGAHALHTAL VALEIASARR VLNRDRTDAA VAGLRAAIAR FESVADGLAA
RITAAPPPAL PRPARAVPWT AGWRTLAWLP AIRAAAAACA AMLIGETLSS ERWMWAVLST
FVVFFGTYSC ADTIYRGAQR VAGTLAGALA SVLVVGAAHH ANALVVIVMG VCVFGWAYHI
LHAYGRGVFF LTVLIGLVYA QLGFEIGALA ELRIGEVLIG CAVSLAAALL VMPLAASRHI
ATRSHGLLAA LRELVHDRDD GIRPGAAQMR AADRRFHDVR MAIRPLAAWR MLRASGDARR
LSDTLLSCWL YGRIVATRLP VEAGGPDVAF ERPARAAVVT RIDALISDLD HGRSMRLDAA
ASVGHGTLAV AGDPSLPAHR ELARLDAKLT ELNRAFEDAL FGKNTGEERS HRADGSALAP
DVREAIRCSG I
|
|---|
| |