Gene Bcenmc03_5630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5630 
Symbol 
ID6128438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2775133 
End bp2775981 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content69% 
IMG OID641652718 
ProductMerR family transcriptional regulator 
Protein accessionYP_001779245 
Protein GI170737985 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.122388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.561699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAC AGGCTCATTC CACGCCCGAC GAGGCCACGC CGGATTCCCG CAACGAGTAC 
ACGGTCGACG AACTCGCGCG CGTGTCCGAC ACCACCGTGC GCAACGTCCG CGCGTACCAG
GACCGCGGGC TGCTGGCGCC GCCGGAGAAA CGCGGGCGCG TCGGCATCTA CGACGACACG
CACGTCGCGC GCCTGAAGCT GATCAACCAT CTGCTCGCGC GCGGCTACAC GCTGTCGAAC
ATCCAGGACC TGATCAAGGC GATCGACGAA GGCCACGACC TGCGCTCGAT CCTCGGCCTC
GAAAACGCGA TCGGCGGCCG CTGGTCGCAC GAGCTGCCGA AAACCTATTC GCTCGCGCAA
CTCGCGCAGA TGTTCGGCCC GCAAGCGACC ACGCAACTGT CGCGCGTGAC CGAGCTCGGG
CTGCTCGAAC GGCGCGGCCT GTCGTTCGTC GCGAAAAGCC CCGCGCTGCT CGAGGCGGCG
GCCGCGATGA CGAAGGAAGG GATTCCGCCG CGCGAACTGC TCGACGTGAT CAGCCTCGCG
CGGCCGCATT TCGACGCGAT CGCGCGGCTG CTCGTCGATC TCGTCGTGAA GCGGCTCGAC
CGCTACGACG CGGGCACGCT GCCGCCGGCC ACCGACGTGC CCGAACTGGT CGACGCGATC
TGGCGGCTGC GTCCGCTCGC TGCCGTGTTC GTCGAAGGCG AGACGAACCG CGCGCTCGAA
ACCGCGGCCG GCGCGTATCT CGGCGGCCGG GTCGCGACGA TCCTCGACAA GAAGCTCAGC
GACGAAGCGG CGCGGCAGTC CGGCGCACCG GATACGTCCG ATCCGGCAGG CCACGACGAC
AAAGCATAG
 
Protein sequence
MSKQAHSTPD EATPDSRNEY TVDELARVSD TTVRNVRAYQ DRGLLAPPEK RGRVGIYDDT 
HVARLKLINH LLARGYTLSN IQDLIKAIDE GHDLRSILGL ENAIGGRWSH ELPKTYSLAQ
LAQMFGPQAT TQLSRVTELG LLERRGLSFV AKSPALLEAA AAMTKEGIPP RELLDVISLA
RPHFDAIARL LVDLVVKRLD RYDAGTLPPA TDVPELVDAI WRLRPLAAVF VEGETNRALE
TAAGAYLGGR VATILDKKLS DEAARQSGAP DTSDPAGHDD KA