| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5629 |
|---|
| Symbol | |
|---|
| ID | 6128437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 2774029 |
|---|
| End bp | 2775009 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641652717 |
|---|
| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
|---|
| Protein accession | YP_001779244 |
|---|
| Protein GI | 170737984 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.265966 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.757434 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGTT TCACCCGCTG GATCACCCGC GCCGCCGCCG TCTCGCTCGT TGCCTTGTCC
GCCGCGTCGG CGTTCGCGCA AGGCGGCGCC GACAAGATCG TGCGCATCGG TTATCAAAAG
GCCGGCCTGC TGTCGATCGT CAAGGCGCAG GGCGCGCTCG AAGCGCGGCT CAAGCCGCTC
GGCTATGGCG TCCAATGGTT CGAATTCCCG GCCGGCCCGC AACTGCTCGA AGCGCTGAAC
GCGAACAGCA TCGACTTCGG CTACACGGGC GCGCCGCCGC CCGTCTTCGC GCAGGCGGCC
GGCGTGCAGT TCGTCTATGT CGGCGCGGAA CCGCCGGCGC CGCACAACGA AGCCGTATTC
GTGAAGGCCG ATTCGCCGAT CCGCACGGTG GCCGCCCTGC GCGGCAAGAA GGTCGCGCTG
CAGAAAGGCT CGAGCGCGAA CTACCTGCTG CTCGAGGCGC TGAAGAAGGC CGGCGTGCGC
TATGACGAAA TCCAGCCGGT CTATCTCCCG CCGGCCGACG CGCGCGCCGC GTTCGAAAGC
GGCAACGTCG ATGCGTGGGC GGTTTGGGAC CCGTACTACG CGGCCGCGCA GAGCGCGCTG
AAGGTGCGCA CGCTGTCCGA CTACACGGGG CTCGCGGCGA CCAACAATTT CTACGAGGCG
ACGCGGAGTT TCGCGCAACA GCATCCCGAC GTGGTCGGCG CGATCCTGAA ACAGGCGCGC
GAAACGGGCC AGTGGGTGAA CGGGCATCCG GCCGACACGG CCGCGCTGCT GGCGCCGAAG
GTCGGGTTGC CGCAGGCGCT CGTCGAGACG TGGATCAAGC GCGTGCCGTT CGGTGCGGTG
CCGCTCGACG AGCGCATCGT CGCCGCGCAG CAAGGTGTGG CCGATGCGTT CTACGCGGCG
AAGCTGATTC CGCAGAAGCT GAGCGTGGCC GACAACGCCT GGGTCGACAA AAACGTCGCG
AGTGCGCTGG CGGCGAAGTA A
|
|---|
| Protein sequence | MIRFTRWITR AAAVSLVALS AASAFAQGGA DKIVRIGYQK AGLLSIVKAQ GALEARLKPL
GYGVQWFEFP AGPQLLEALN ANSIDFGYTG APPPVFAQAA GVQFVYVGAE PPAPHNEAVF
VKADSPIRTV AALRGKKVAL QKGSSANYLL LEALKKAGVR YDEIQPVYLP PADARAAFES
GNVDAWAVWD PYYAAAQSAL KVRTLSDYTG LAATNNFYEA TRSFAQQHPD VVGAILKQAR
ETGQWVNGHP ADTAALLAPK VGLPQALVET WIKRVPFGAV PLDERIVAAQ QGVADAFYAA
KLIPQKLSVA DNAWVDKNVA SALAAK
|
|---|
| |