Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5582 |
Symbol | |
ID | 6128390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 2726080 |
End bp | 2726982 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641652670 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001779197 |
Protein GI | 170737937 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.651433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00527291 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGCTTCG ATATCGTCGA CCTCAAACTT TTCACGCACA TCGCGGAAGC GAACAGCCTG ACACGCGGCG CCGAACGCGC GCATCTGTCG GTGCCGGCCG CCAGCACCCG CATCAAGCAC CTCGAGGAGC AGGTCGGCGT GAAGCTGCTG AGCCGCACGA GCCAGGGCGT CACGCTGACC GCACCGGGCG ACACGCTGCT CGCGCATGCG CGCCGCGTGC TGCGCCAGCT CGAGCAACTG ACCGGCGACC TGCAGGAATA TGCGTCGGGC GTGAAAGGCC ACGTGCGCGT GTTCGCGAAC ACCACGGCGA TGAGCGAGTT CCTGCCGGGC GTACTGCGTC ACTATCTCGT CAACCATCCG GACGTGACGA TCGACATGCA GGAGCGGCTG AGCCCCGACA TCGTGCGCGC GGTGCAGGAC GGCATGATCG ACATCGGCAT CGTCGCCGGC GACGTGTGCA CCGACGGGCT GCAGGCGATG CCGTACCGGC GCGATCGTCT CGTGCTCGCG ACCGCGCTCG GGCACCCGCT CGCCAGCCTG GCATCGACGC CGTTCGTCGC GACGCTCGAC CACGACTTCA TCGGCCTGCC CGAGGCGAGT GCGATCCATA CCTTCCTGAA GCGCGCGGCC GCCGACGTGC AGCGCACGCT GCGCTGGCGC ATCCAGGTCA GCAACTTCGA AACCGCATGC CGGATGATCG AGGCGAACGT CGGCGTCGGC GTGCTGCCCG AAGGCACCGC CCGCCGCCAT GCGAGGACGA TGGCGCTGCG CCTCGTCGCG CTCGAGGACG ACTGGGCCGA GCGCCGGTTG CAGATCTGCG TCGCCGATCT CGATGCGTTG CCGCGCTTCG CGCGCGATCT CGTCGACCTG CTCGTCGAGG ATGCGCGCGA GCGACCGGAC TGA
|
Protein sequence | MRFDIVDLKL FTHIAEANSL TRGAERAHLS VPAASTRIKH LEEQVGVKLL SRTSQGVTLT APGDTLLAHA RRVLRQLEQL TGDLQEYASG VKGHVRVFAN TTAMSEFLPG VLRHYLVNHP DVTIDMQERL SPDIVRAVQD GMIDIGIVAG DVCTDGLQAM PYRRDRLVLA TALGHPLASL ASTPFVATLD HDFIGLPEAS AIHTFLKRAA ADVQRTLRWR IQVSNFETAC RMIEANVGVG VLPEGTARRH ARTMALRLVA LEDDWAERRL QICVADLDAL PRFARDLVDL LVEDARERPD
|
| |