Gene Bcenmc03_5577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5577 
Symbol 
ID6128385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2719778 
End bp2720485 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content66% 
IMG OID641652665 
ProductMgtC/SapB transporter 
Protein accessionYP_001779192 
Protein GI170737932 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000861867 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00823603 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTTTCG ATTTCGCACT TCGCCTTTTC ACCGCGTTCG CCTGCGGCGT CGCCATCGGC 
CTCGAGCGCC AGATGCGCCA GCGCACGGCC GGCCTGCGCA CCATCACGCT CGTCGCGAGC
GGCGCGTGCC TGTTCGTCAC GCTCGGCGTG CTGACCGGCA ACGGCGTCGC GGGCGTCACA
CAGATCGCCG CGTATGTCGT GTCGGGCGTC GGCTTTCTCG GCGGCGGCGT GATCATGCGC
GACAAGGGCT CGATCCAGGG CATCAACACG GCCGCGACAC TGTGGTGCTC GGCCGCCGTC
GGCGTACTGG CCGGCTCCGG CCACTACGTG CCCGCGCTCG CCGGCACCGG CGTCGTGCTG
CTCACCAATA CGGTGCTGCG CGGCGTCAGC CAGGCCATCA ACGCGACGCC CGTCTCCAAT
GCCGATCTCG TGCGCGAATA TCAGATCACC GTGATCTGCC TTGCCGCCGA CGAAGTGCAC
ATCCGTACGC TGCTGTCGAA CGCGATGTAT GCGAAGCCGC TGTCGTTCCA GAGTCTCACG
AGCGAGGACG TGCCCGACCA GCCGGACCGG CTGAAGGTCA CCGCGACGTT GAAGCTGCAT
CCGAAGGATC AACAGAAGCT CGAGCAGATC GCGAGCCGGA TGAGCATGGA GAAAAGCATT
TCCAGCGTGA GCTGGACCGC GAAGGAAGCG GAGCCGATGA TGGAGTGA
 
Protein sequence
MTFDFALRLF TAFACGVAIG LERQMRQRTA GLRTITLVAS GACLFVTLGV LTGNGVAGVT 
QIAAYVVSGV GFLGGGVIMR DKGSIQGINT AATLWCSAAV GVLAGSGHYV PALAGTGVVL
LTNTVLRGVS QAINATPVSN ADLVREYQIT VICLAADEVH IRTLLSNAMY AKPLSFQSLT
SEDVPDQPDR LKVTATLKLH PKDQQKLEQI ASRMSMEKSI SSVSWTAKEA EPMME