Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5566 |
Symbol | |
ID | 6128375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 2710810 |
End bp | 2711760 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641652655 |
Product | integrase catalytic region |
Protein accession | YP_001779182 |
Protein GI | 170737922 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0200505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0677233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCC ATAAGAATGC CCGACTCACT TTCGCACGTC GACTTGAGAT GGTTCAGGAG ATCACCGAAT CCGGTTCGAG CGTGTCGCAA GCGGCGGCCG ATCACGGCGT GACAGCACCG ACTGTGCGCA AATGGCTTGG ACGCTACCTA GCCGGCGGTG CGGTTGCGCT GGCTGACGCT TCTTCTCGAC CGGCTCGCTC TCCACGCGCC ATCGCCCCGT CGACGGCCTT ACTGATCGTG GAATTGCGCC AGCAGCGCTT GCTGCAACGT CAGATCGCTC GACAGGTGGG AGTGTCGGCC TCGACCGTCA GTCGGGTGCT GGTGCGTGCC GGACTGTCTC GGTTGAGCGA CCTGCAACCG CGTGAACCGG TTCAGCGCTA CGAGCACGAG GCGCCGGGCG ATTTGCTGCA CATCGACATC AAGAAGCTTG GCCGTATCGC GCGTCCTGGC CATCGTGTCA CCGGCAATCG GCGCGATACA GTGGACGGCG TTGGCTGGGA GTACCTGTTC GTCGCAGTGG ACGATCACGC CCGGATTGCC TACACGGCAA TGCATCCAGA CGAGACGAAA CGCAGTGCCG TGCAGTTCCT GCGCGATGCA GTGGCTTGGT ACGCCGGACT CGGCGTGCGT GTGCATCGCT TGCTAACCGA CAACGGTTCG GCGTTTCGCT CACACGAGTT TGCGCGAGCC TGTCAGGAAC TGGGTATCCG GCACAAATTT ACGCGGGCGT ATCGTCCGCA GACCAACGGC AAGGCCGAAC GCTTCATCCA GTCAGCGTTA CGCGAATGGG CCTACGCATG GACATACCAG AGCTCGGCCC ATCGCATCGA AGCCTTGGCG AGTTGGCAGC ACCACTACAA CTGGCATCGT GCCCATAGCG CCATCGGCGG CGTTGCGCCG ATGGCCAGAC TTCCCGCGTC GAGAAACAAC CTCTTGACGC TTCACATCTA G
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Protein sequence | MNTHKNARLT FARRLEMVQE ITESGSSVSQ AAADHGVTAP TVRKWLGRYL AGGAVALADA SSRPARSPRA IAPSTALLIV ELRQQRLLQR QIARQVGVSA STVSRVLVRA GLSRLSDLQP REPVQRYEHE APGDLLHIDI KKLGRIARPG HRVTGNRRDT VDGVGWEYLF VAVDDHARIA YTAMHPDETK RSAVQFLRDA VAWYAGLGVR VHRLLTDNGS AFRSHEFARA CQELGIRHKF TRAYRPQTNG KAERFIQSAL REWAYAWTYQ SSAHRIEALA SWQHHYNWHR AHSAIGGVAP MARLPASRNN LLTLHI
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