Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5552 |
Symbol | |
ID | 6128362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 2696943 |
End bp | 2698217 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641652642 |
Product | integrase family protein |
Protein accession | YP_001779169 |
Protein GI | 170737909 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGATTCG ACGCACGCAC CGCGAGCAAG CTGCCTGCGG GCCAACACAT AACCTTTGAC GGATTCCCGG GCCTTCGCTT CCAGGCCAGC GAGAGCCGTC GCTCGTGGAT CTACCGATAC AAGTCGCCCA TTGACGACCG AATGCGCCAG GTGAAGCTCG GCGAGTGGCC AGCCATGGGT TTCCCTGCGG CGATTTCGGA ATGGGAGCAA AAGCGAGCGG CGCGTGATGC TGGGGGCGAT CCTGCTGCTG CAAAGCGCGA GAAGCGCGCT GCGGTTGCCA ATTCGCGCGC CGTCGACGCA TACACCGTCA AGCAAGTGTG TTTCGACTAT ATGGGCGGAT ATCTGGAGCC GAACCGCAAG GATAAGGGCG TGATCGAGGT TAGGCGGATG TTCAAGGCGA TGCTCGGCCC GATCGAGAAA GTTCCGGCCG CGTCCATAAC TCGTGCCCAG GCGTTCGAAT TCTTGGATTC GTATCGCGCC ACGCCGGCGC TCGCTGCGCG CCTCCGCATG GAGCTGGGCG GAGCGTGGGA CTATGCGATG GACGCTGGGA GGTTGCCCGA TGGCACGCCG AACTGGTGGC GAATGATTCT GCGCGGCAAG CTTCGCAGCA AGGGGCGCAC GATCGACGGC GTCGCCATGG GCACAAAAAA GCGGGTATTG AGCGAGGATG AGGTCGGCAC GCTGCTCCGC TGGCTGCCGA ATATGAGCCT AACGGTTTCG GACGCGATCA CGTTGTATCT GTGGACGGGC GCCCGTGGCG GCGAAATCAT TTCGATGGAG TTGCACGAAA TCGCCGACGA GGCGGACGGC CTATGGTGGA CCGTGCCGAA GGAAAAAACC AAGAACTCGT GGCGCGCGAA AGCAGGGGAT TTGCGGGTGC CGCTCGTTGG TCGAGCCGAG GCCGTTGTCC GTCGACGCAA GGACCAGGCC GTGAACGGCT TTCTGTTCCC GACGTCGACC GGCGAGATGA TGAAGCAGAC CGTCATTTCG CACGGCATTT ACTATCATCA GCCATACTGT AAGCAGGCGC CGAATCATAA TCGGCCGCGG CTACCTGTCA CGCACTGGTC GCCTCACGAT TTGCGGAAGA CCGCTCGAAC TATGCTTGCC GCACTTGGGT GCCCGCATGA TGTCGCGGAG GCGGTACTTG GTCATATTCA ACCCGGTGTT GCCGGCGTGT ATAACCGACA CCACTACGAT CGGGAGCGCC GAGAGTGGCT TACACGCCTG TCGCAGTTCC TTGATGAACT CGCACAGCGA TATCCGACTA AGTAA
|
Protein sequence | MRFDARTASK LPAGQHITFD GFPGLRFQAS ESRRSWIYRY KSPIDDRMRQ VKLGEWPAMG FPAAISEWEQ KRAARDAGGD PAAAKREKRA AVANSRAVDA YTVKQVCFDY MGGYLEPNRK DKGVIEVRRM FKAMLGPIEK VPAASITRAQ AFEFLDSYRA TPALAARLRM ELGGAWDYAM DAGRLPDGTP NWWRMILRGK LRSKGRTIDG VAMGTKKRVL SEDEVGTLLR WLPNMSLTVS DAITLYLWTG ARGGEIISME LHEIADEADG LWWTVPKEKT KNSWRAKAGD LRVPLVGRAE AVVRRRKDQA VNGFLFPTST GEMMKQTVIS HGIYYHQPYC KQAPNHNRPR LPVTHWSPHD LRKTARTMLA ALGCPHDVAE AVLGHIQPGV AGVYNRHHYD RERREWLTRL SQFLDELAQR YPTK
|
| |