| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5539 |
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| Symbol | |
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| ID | 6128349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 2684971 |
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| End bp | 2686482 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641652629 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001779156 |
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| Protein GI | 170737896 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.541532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG CTTTCCGTCT TTCCGCGCTC GCGATGTCGG TGACGCTCGC CGCATGCGCG
GTGGGCCCCG ATTTCAAACG GCCCGATACC GCCACGGCCG CCCGGTTCGC GCGCGATGTT
CGTCCGGCCA CGCAGCGTGA CGCGGCGCCG GCCGATACAC GGACCGACAC GTCGCCCGAC
GCCGATGCCG CCTTCTGGCG CGGGTTCGGC GATCCGACGC TGACACGGTT GATCGATGCG
GCGCTCGCGG CGAACCAGGA CTTGCAGGTC GCCGTATCGC GCTACGACGC GTCGAATGCG
CTGCTGTCGC AGGCCACGTT CGACCGCTAT CCGACGATCA CCGCGAGCGG CCAGATCGGC
CATCAGCTGA TGAGCAAGGA CCAGGCGTTC GGCGCGCCGC GCAGCCAGCG CGATACGCCG
ACGTCCAGTG TCGGGATCAA TGCCGCGTGG GAGCTCGACC TGTTTGGCCG CGTGCGCCGC
TCGATCGAGT CGCAGCGTGC GGAAACGGCG GCCAGCGCGG CCGACGTGCG TGCGGTGCGC
GTCGCGATCG CGGGGGAGGT CGCGAGCACG TACGTCGATC TGCGTGGCTC GCAGGAGCGG
TTGCGGATCG CCCGCGAGAA CGCCGACAAC CAGAAGCAGA CGCTCGCGCT GATCAATGCG
CGCGTCGGCG CGGGGCGAGG CTCCGAACTG GATGCGGCGC GAGCGCGTGC CCAGTACGAA
TCGACGACCT CGCGGATCGC CGTGTACGAA GCCGCGATCG GCGTCGACGA GCATCGGCTC
GCGGTGCTGA CCGGGCAGAC GCCGGATGCA CTGATCGGCC GGTTCGATTT ACCGAAGACG
GGCACACCGA CGGGCATGCC GGTGCCGCTG CCGGCGCTCG CGGCCGACAT CGATCCCGGC
ACGCCGGGCG ACCTGCTGCG CCGCCGCCCC GATGTCGCGG CCGCCGAGGC GCGGCTGCAT
GCGGCGACCG CGCGCGTCGG CGTCGCGACC GCCGACCTGT TCCCGCGCTT CACGCTGTCG
GGGCTGCTCG GCAGCGCGAC GAGCAGCTAC GGGTTCTTCC GCGCGGGCAG CGACACCAAC
CTGATCGCGC TCGGCATCGA CTGGTCGTTC CTCGACGTCG GCCGCGTGCG TGCGCGGATC
GCCGCGAGCG ACGCGGAAGC GGCCGGCCAG CTTGCACAGT ATCGGCAGAC CGTGCTTGGC
GCGCTGGAGG AAACCGAGAA CGCGCTGCTG CGTGTCGCCC GCACGCGTGA CGAGACCGCG
CACCTCGTGC GGGCGGCCGA CGACAGCGCA CGCGCGGCGC AGCTCGCGCA GGCGCGTTTC
TCGGCCGGCG CGATCGACTA CTACGAAGTG CTCGACGCGC AGCGGACGCT GCTGCAGGCA
CAGGATGCGG CGGCCGACGG GCGGATGCGC AGCGCCGCAT CGACGGTCGC GCTGTACAAG
GCGCTCGCGG GCGGCTGGCC GTCGGGCACG GAGCGGGGCA CGCCAGGTCC GCTCGCTCAG
TCGGGGCAGT AG
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| Protein sequence | MSAAFRLSAL AMSVTLAACA VGPDFKRPDT ATAARFARDV RPATQRDAAP ADTRTDTSPD
ADAAFWRGFG DPTLTRLIDA ALAANQDLQV AVSRYDASNA LLSQATFDRY PTITASGQIG
HQLMSKDQAF GAPRSQRDTP TSSVGINAAW ELDLFGRVRR SIESQRAETA ASAADVRAVR
VAIAGEVAST YVDLRGSQER LRIARENADN QKQTLALINA RVGAGRGSEL DAARARAQYE
STTSRIAVYE AAIGVDEHRL AVLTGQTPDA LIGRFDLPKT GTPTGMPVPL PALAADIDPG
TPGDLLRRRP DVAAAEARLH AATARVGVAT ADLFPRFTLS GLLGSATSSY GFFRAGSDTN
LIALGIDWSF LDVGRVRARI AASDAEAAGQ LAQYRQTVLG ALEETENALL RVARTRDETA
HLVRAADDSA RAAQLAQARF SAGAIDYYEV LDAQRTLLQA QDAAADGRMR SAASTVALYK
ALAGGWPSGT ERGTPGPLAQ SGQ
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