Gene Bcenmc03_5533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5533 
Symbol 
ID6128343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand+ 
Start bp2677527 
End bp2678186 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content69% 
IMG OID641652623 
ProductTetR family transcriptional regulator 
Protein accessionYP_001779150 
Protein GI170737890 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.445482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.987341 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGAAG TCACTGAGCG CGCGCCGTCG AAGCGGCGTA CGCGCGGACG GCCGCTGGCG 
GATGCGTCCG TCGGCCCGGA CGTGATATTG CGGGCCGCGC GCCGCACGTT CGCGAAGCGC 
GGCTATGACG CGACGAGCGT GCGCGAAGTC GCACGCGAGC TGGGCATCGA CGCGGCGCTG 
ATCGCCCATC ACTTCGGTAC CAAGGAAACG TTGTGGCTGG CGGTCGTCGA GCAGATCGTC 
GAGCTGGCCG AACCGATGTT CGACGCGCTG CGTGCGTTGC GCGCGTCGTC GCTGCCGCAT 
CGCGACCGCG TGCGGCGCGC GCTCGAGCTG TGCGTCGATC ACGAATTCGC GGAGCCCGAT 
ATCGGCATGT TCTTCTCGAC TGCGGCGACC GAGGAGGGTG GGCGGCTCGA CCGGCTGCAG 
GAGCGGATCG TGCGTCCGTA TCACGACGCG ATGTTTCCGC TGCTGGCGGA CGCGGTCGAG 
GCCGGCGCGA TCCGTCCGGT CGATCCGAAC GTGCTGTTCT TCATGATCGC GAGCGCGATC 
GGCACGACGG TGTCGTACAG CCACATGATG CTGGAGTACA CGTCGCTGCC GACGCGGCCG 
GAGGCGTTCC GCGAGGCCGT GCTCGGCGTC GTGTTCAACT TCCTCGGCGA CCGGGCCTGA
 
Protein sequence
MAEVTERAPS KRRTRGRPLA DASVGPDVIL RAARRTFAKR GYDATSVREV ARELGIDAAL 
IAHHFGTKET LWLAVVEQIV ELAEPMFDAL RALRASSLPH RDRVRRALEL CVDHEFAEPD 
IGMFFSTAAT EEGGRLDRLQ ERIVRPYHDA MFPLLADAVE AGAIRPVDPN VLFFMIASAI 
GTTVSYSHMM LEYTSLPTRP EAFREAVLGV VFNFLGDRA