| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5517 |
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| Symbol | |
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| ID | 6128327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 2659817 |
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| End bp | 2660989 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641652607 |
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| Product | porin |
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| Protein accession | YP_001779134 |
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| Protein GI | 170737874 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA GGCTGACATG GGGCGCTGCG TGCCTGGCGC TGGGCGCCGG AAGTGCCTGC
GCGGTGCCGT ATCAGGACGT ACTGCTTGCG GCGGTGCCGG AGTTCAACGG CGGATTGAAG
GAGGGTGTGG CGCTGTACGG CTCGGTCGAC ATGGGGATCA ACTACCAGTC GGTGGGTGGA
CGGTCGACGT GGCAGACCCA GAGCGGCGGC GAGTGGACGT CGAAATTCGG CTTCTTCGGG
CGCGAGAATC TCGGCGGCGG GTGGCGCGCC GAATTCAATC TCGAAAGCGG TTTTCTCGCG
AACAACGGCG CGCAGCAGGA TACGCAGTCG TTCTTCAACC GGCAGTCGTG GATCGGCCTG
ATGTCCGACC GCTATGGCCG GCTGCGGCTC GGCAAGCAGA TCGGCACGGG GCTGCCGCTG
TTCATCGACG TGTTCGGCAC CGTGGGCACC AATTCGGTGT ACACGTGGCT TGGCGCGGCC
GCCGTGCAGA CGGCGCGCGG CGTCGGCTAC AACAGCGACC TCGGACCGGG CGCGACACAA
CTGCCGGCGC GCGTCGACAA CGCGATCACC TATCGGACGC CGATCGTGGC CGGCACCACG
ACGCTGATGC TGATGTACGC GCCCAGCAAC GTCGCGGGGC GCGCGCCGGC CGCGTCCGCG
CAGGGCGCGC TGCTGCAGTG GTACAACGGC ACGACCTATC TGGCGGCGAG CTACAACCAG
GTGTGGGGCG TCAACGGGGC GAGCACGGTA CGCAACGACC TGTACGGGCT TGGCGCCGTC
TACGACACCG GGCGGCTCGT GCTGTCCGCG TCGTTCAATC AATATGCGCC GAAACTTGCC
GGCGACGGGA TCGCACGCGT GTACACCCTC GGCACGATCG TGCCGTTCGG CGTGAATGCG
GTTCGCGCGT CGATCGTCTA TCGCGATACG TCGGGCGTGC GCGATGCCGC CGGCCGGCCG
GCGAAGGATT CGGCGCTCGG CGTCATGCTC GGCTACGACT ACCTGTTGTC CAAACGTACC
GGCCTCTACG CGCGGACGGG GTTCATCCGC AATTACGGGA TGTCGACCGT TCTGCTGAAC
GGCAATCCGT TGCCGACCGA GCCCGGCGGC ACGACGCCGC GCACCGGCAT GACGCCCGTG
ACGATGTCGC TCGGCATGTA TCACAACTTC TGA
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| Protein sequence | MKKRLTWGAA CLALGAGSAC AVPYQDVLLA AVPEFNGGLK EGVALYGSVD MGINYQSVGG
RSTWQTQSGG EWTSKFGFFG RENLGGGWRA EFNLESGFLA NNGAQQDTQS FFNRQSWIGL
MSDRYGRLRL GKQIGTGLPL FIDVFGTVGT NSVYTWLGAA AVQTARGVGY NSDLGPGATQ
LPARVDNAIT YRTPIVAGTT TLMLMYAPSN VAGRAPAASA QGALLQWYNG TTYLAASYNQ
VWGVNGASTV RNDLYGLGAV YDTGRLVLSA SFNQYAPKLA GDGIARVYTL GTIVPFGVNA
VRASIVYRDT SGVRDAAGRP AKDSALGVML GYDYLLSKRT GLYARTGFIR NYGMSTVLLN
GNPLPTEPGG TTPRTGMTPV TMSLGMYHNF
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