Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5508 |
Symbol | |
ID | 6128318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 2650905 |
End bp | 2652143 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641652598 |
Product | extracellular solute-binding protein |
Protein accession | YP_001779125 |
Protein GI | 170737865 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTGC TGAGCCGCCT GCGCGCGCTG TCCGCCGCCG TTGCGCTATC CGTTGCCGCC ACGCACGCTT TCGCGGCGGA CCTCGTCATC GCGGGCCGCG ACGACATCTA CGGCAAGGGG CTGGCCGACG CCGTCGCCGG CTTCAACAAG CTGCATCCGG GCACCGAGAT CGAGCTGCTC AAGCTGCCGA ACGCGAACCT GTACCAGAAG CTGAAGCTGT CGATGCGCGA AGGCACCGGC GCGTACGACC TCGTGATGAT GGACGACACG TGGGCGCCGG AATTCATCGG CAACGGCTGG CTGAAACCGC TGCCCGCGTC GCTCGCGGAC GCCGATCTCG TGCCGTCCGC CGTCGCGCTC GGCCGCAATG CGGCCGGTGC GCTGTACGCG CTGCCGATCG TCGGCAACGT CGAGATGTTC GCGTACCGCA AGGATCTGCT CGCGAAGTAC AAGCTGCAAC CGCCGCGCAA CTGGGACGAC GTGCTGAAGA TCGCGCAGAC CGTCGGCGGC GCGGACAAGA GCGTGTCGGG CGTCGTGTTC CGCGGCACGA AGGGCAACCC GGTCGTCACG GGCTTCCTGC CGATTCTGTG GGCATACGGC GGCGACGTGT TCGACCGTGC CGGCAACGTG ACGATCGATT CGCGCGAAGC GCAGGCCGCG CTGAAGACGT TCCTCGCGCT GAAGGCGTTC GCACCGAAGG ACGTCGACGT ATACGGCGCG GCCGAAGTGC GCGACGCGCT GCAACGCGGC ACGGCGGCGC AGTCGATCGA GGTGTGGCCC GCCTGGGTGC CGGCGCTCGA TGACGCGAAG CAGTCGCGCG TGGTCGGGCA GATCGCGCTG CAGCCGCCGC CGGGGCAGAC CGCGGGCCCG GCGCCGATGC TCGGCATCTG GCAGATGGGC ATTCCGAAGG ACGCGCCGCA CGCGAAGCTC GCGCAGGACT TCCTCGCTTA CCTGACCGCA CGCGATACGC AGACGCGCCT CGCCGGCATC GGCATTCCGC CGACTCGCCG CAGCGTGTTC AACGATCCGG CGCTGGTGCG CCAGTACCGC TGGTATCCGG ATCAACTGAA GGCGCTCGAG GCCGGCCGCG CGCGGCCGCG CGTGACGGAC TGGCAGCAGG TCGAAAGCAT TCTCGGCGAT CAGCTTCAAC TCGCGCTGAC GGGGCAGGCC GCGCCCGACG CCGCGCTGCG CCAGGCGCAG CAGAAGATCG CGCAGGCGAC GGCCGCGGCC GGCAAGTGA
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Protein sequence | MTLLSRLRAL SAAVALSVAA THAFAADLVI AGRDDIYGKG LADAVAGFNK LHPGTEIELL KLPNANLYQK LKLSMREGTG AYDLVMMDDT WAPEFIGNGW LKPLPASLAD ADLVPSAVAL GRNAAGALYA LPIVGNVEMF AYRKDLLAKY KLQPPRNWDD VLKIAQTVGG ADKSVSGVVF RGTKGNPVVT GFLPILWAYG GDVFDRAGNV TIDSREAQAA LKTFLALKAF APKDVDVYGA AEVRDALQRG TAAQSIEVWP AWVPALDDAK QSRVVGQIAL QPPPGQTAGP APMLGIWQMG IPKDAPHAKL AQDFLAYLTA RDTQTRLAGI GIPPTRRSVF NDPALVRQYR WYPDQLKALE AGRARPRVTD WQQVESILGD QLQLALTGQA APDAALRQAQ QKIAQATAAA GK
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