| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5492 |
|---|
| Symbol | |
|---|
| ID | 6128302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 2633296 |
|---|
| End bp | 2634198 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641652582 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001779109 |
|---|
| Protein GI | 170737849 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.28545 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCG ATCTGAACTG GGAACGCTAC CGCACCTTCC TCGCGGTCCT GACGGAAGGC
TCGCTGTCCG GCGCGGCGCG CGCGCTCGGC ATCACGCAGC CGACGGCCGG CCGCCATGTC
GCGGCGCTCG AAGCCGCGTT CGGCCAGACA CTGTTCACGC GCTCGCCGTC GGGCCTGCTG
CCGACCGAGG CCGCGCTCGC GCTGCGCGGC CACGCGGAGG CGCTGCGCAG CGCGGCGGCC
GCGTTCGAGC GCGCGGCGGC CAGCCACGGC GCCGGCGTGC GCGGCATCGT GCGGATCTCG
GCCAGCGACG TGATCGCCGT CGAGGTACTG CCGCCGCTGC TCGCGCAGTT GCGGCGCGAT
CATCCGGGGC TCGTGATCGA ACTGGTGCCG ACCGACCGCA TCCAGGACGT GCTGAAGCGC
GAGGCCGACA TCGCGGTGCG GATGGCGCCG CCCGCGCAGG ACGCGCTCGT CGCGCGGCGC
GTCGGCGAAA TCGAGGTCGG GCTGTATGCG CGCGACGATT ACCTGGCGCA CCACGGCGCG
CCCGCGACGA TCGATGCGCT CGCGCATCAC ACGCTGATCG GCTTCGATAC CGTCACGCCG
TTCATTCGTT CGGCGGGGCG CGGCATGCCG CTGTGGAAGC GCGACGCGTT CGCGCTGCGT
ACCGACAGCA ATCTCGCGCA GCTCGCGATG ATCCGTGCCG GCTACGGGAT CGGTTTCTGC
CAGTCGGCGC TCGCGAAACG CGACGCACGG CTCGTACGCG TGCTGCCGGA CGCGCTCGGG
ATGCGGCTGG ACACCTGGGT CGTGATGCAC GAAGATCTGC GGACCAGCCC GCGCTCCCGG
GCCGTGTTCG ATGCGCTGGC CAACGGGCTG CGGGCGTATG CGGACGGTGA GGTCGCCGAG
TAG
|
|---|
| Protein sequence | MTIDLNWERY RTFLAVLTEG SLSGAARALG ITQPTAGRHV AALEAAFGQT LFTRSPSGLL
PTEAALALRG HAEALRSAAA AFERAAASHG AGVRGIVRIS ASDVIAVEVL PPLLAQLRRD
HPGLVIELVP TDRIQDVLKR EADIAVRMAP PAQDALVARR VGEIEVGLYA RDDYLAHHGA
PATIDALAHH TLIGFDTVTP FIRSAGRGMP LWKRDAFALR TDSNLAQLAM IRAGYGIGFC
QSALAKRDAR LVRVLPDALG MRLDTWVVMH EDLRTSPRSR AVFDALANGL RAYADGEVAE
|
|---|
| |