Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5489 |
Symbol | |
ID | 6128299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 2630419 |
End bp | 2631879 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641652579 |
Product | major facilitator transporter |
Protein accession | YP_001779106 |
Protein GI | 170737846 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.157895 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAACA ACACCCTCGC CCCCTGCGCA CCAGCCTGCG CGGCCGCCGC GGCGACGCCG CGCAGCCATC ATAGCTGGGC GCTCGTGGTC CTGCTGGTCG GCGCCATTCT GCCGCCGCTC GACTACTTCA TCGTGAATCT CGCGCTCCCG GCCATTCGCG ACGGCATCGG CGCGCACCAG GCCGAGTTGC AGCTCGTCGT GTCGGCCTAT GCATGCGCGA ACGCGGTCGT CCAGATCACC GGCGGGCGGC TCGGCGACCT GTACGGACGC AAGCGCATGT TCATGATCGG CATGGCCGGC TTCGTGCTCG CGTCGACGCT GTGCGGGCTC GCCGACAACG GCACGGTACT CGTCGGCGGC CGCGTGCTGC AGGGCCTGTT CGCCGCGATC CTCGCGCCGC AGGTGCTCGC GACGATCCGC AGCGTGTTCA GCCCGCAGGA ACAGGTGCGC GTGATGGGCT TCTACGGGTT CGCGTTCGGC CTCGCGGCCG TGATCGGCCA GCTTGGCGGC GGCGCGCTGA TCAGCCTGCA TCCGTTCGGG CTCGGCTGGC GCGCGATCTT CCTCGTCAAT CTGCCGATCG GCATCCTGGC GCTGATCGGC AGCTGGCGCT TCATCCCGGA AAATCGCGCG CCGCGCGGCC AGCGCATCGA CGTGCCGGGT ACGGTGCTGA TGTCGCTGTT CCTGCTGATG CTCGTGTACC CGCTCACGCA TGGTCGGGAA GCCGGCTGGC CGCTGTGGAT GATCGCGTGC GGCGTCGGCG CGCTGCCGAT GCTCGGCGCG CTGCTGGCGG TCGAAGCGCG CCGGCTCGCG CGCGGCCACG ATCCGCTGCT CGACGTGCGG CTGCTCCGCA ACCCGGTCGT CGCGCTCGGG CTCCTGCTCG CGTTCCTGTT CTACACGCTG AGTGCGTTCT TCCTGAGCTA CGGGATCTAT CTGCAGGGCT GCCTGAACTG GTCGCCGCTC GCGTCCGGGT TCGCGATCCT GCCGCTCGGG CTCGGTTTCC TCGCGAGCCC GCTGCTGACG ACGCGCCTCG TCGCCCGCTT CGGCGGGTAT CGCGTGCTCA CGCTCGGCTT CGCGATGCTC GCGGCCGGCG TCGCGATCGC CGCCGCGCTC GCCCGCGACG GCGCGCCGGG GCCCGGCTTC TATGCGGGCA TCGCGGCGAT CGGCATCGGG CAAGGGCTCG TGCTGCCGTC GGTCGTGCGG ATCGTACTCG CGGAAGTCGA TGCGGCCCGC GCGGGAGTCG CGTCCGGGAT GGTCAGCGCG ATGCTGCAGA TCGGCGCGGC GGTCGGCGCC GCGACGATCG GCGGCGTGTT CTTCGCGCGG CTCGGCGTGC ATCCGGCCGC GCTCGATTAC GTGCAGGGCT TCAGGGCGTC GATGTTCACG CTGACAATCG TGCTGCTGGG CTGCGTCGCG CTGTCGATGG CGCTCGGGCC GCTGCATCGG CGGCTGCATG CGGATGCGTG A
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Protein sequence | MTNNTLAPCA PACAAAAATP RSHHSWALVV LLVGAILPPL DYFIVNLALP AIRDGIGAHQ AELQLVVSAY ACANAVVQIT GGRLGDLYGR KRMFMIGMAG FVLASTLCGL ADNGTVLVGG RVLQGLFAAI LAPQVLATIR SVFSPQEQVR VMGFYGFAFG LAAVIGQLGG GALISLHPFG LGWRAIFLVN LPIGILALIG SWRFIPENRA PRGQRIDVPG TVLMSLFLLM LVYPLTHGRE AGWPLWMIAC GVGALPMLGA LLAVEARRLA RGHDPLLDVR LLRNPVVALG LLLAFLFYTL SAFFLSYGIY LQGCLNWSPL ASGFAILPLG LGFLASPLLT TRLVARFGGY RVLTLGFAML AAGVAIAAAL ARDGAPGPGF YAGIAAIGIG QGLVLPSVVR IVLAEVDAAR AGVASGMVSA MLQIGAAVGA ATIGGVFFAR LGVHPAALDY VQGFRASMFT LTIVLLGCVA LSMALGPLHR RLHADA
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