Gene Bcenmc03_5489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5489 
Symbol 
ID6128299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2630419 
End bp2631879 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content71% 
IMG OID641652579 
Productmajor facilitator transporter 
Protein accessionYP_001779106 
Protein GI170737846 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.157895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACA ACACCCTCGC CCCCTGCGCA CCAGCCTGCG CGGCCGCCGC GGCGACGCCG 
CGCAGCCATC ATAGCTGGGC GCTCGTGGTC CTGCTGGTCG GCGCCATTCT GCCGCCGCTC
GACTACTTCA TCGTGAATCT CGCGCTCCCG GCCATTCGCG ACGGCATCGG CGCGCACCAG
GCCGAGTTGC AGCTCGTCGT GTCGGCCTAT GCATGCGCGA ACGCGGTCGT CCAGATCACC
GGCGGGCGGC TCGGCGACCT GTACGGACGC AAGCGCATGT TCATGATCGG CATGGCCGGC
TTCGTGCTCG CGTCGACGCT GTGCGGGCTC GCCGACAACG GCACGGTACT CGTCGGCGGC
CGCGTGCTGC AGGGCCTGTT CGCCGCGATC CTCGCGCCGC AGGTGCTCGC GACGATCCGC
AGCGTGTTCA GCCCGCAGGA ACAGGTGCGC GTGATGGGCT TCTACGGGTT CGCGTTCGGC
CTCGCGGCCG TGATCGGCCA GCTTGGCGGC GGCGCGCTGA TCAGCCTGCA TCCGTTCGGG
CTCGGCTGGC GCGCGATCTT CCTCGTCAAT CTGCCGATCG GCATCCTGGC GCTGATCGGC
AGCTGGCGCT TCATCCCGGA AAATCGCGCG CCGCGCGGCC AGCGCATCGA CGTGCCGGGT
ACGGTGCTGA TGTCGCTGTT CCTGCTGATG CTCGTGTACC CGCTCACGCA TGGTCGGGAA
GCCGGCTGGC CGCTGTGGAT GATCGCGTGC GGCGTCGGCG CGCTGCCGAT GCTCGGCGCG
CTGCTGGCGG TCGAAGCGCG CCGGCTCGCG CGCGGCCACG ATCCGCTGCT CGACGTGCGG
CTGCTCCGCA ACCCGGTCGT CGCGCTCGGG CTCCTGCTCG CGTTCCTGTT CTACACGCTG
AGTGCGTTCT TCCTGAGCTA CGGGATCTAT CTGCAGGGCT GCCTGAACTG GTCGCCGCTC
GCGTCCGGGT TCGCGATCCT GCCGCTCGGG CTCGGTTTCC TCGCGAGCCC GCTGCTGACG
ACGCGCCTCG TCGCCCGCTT CGGCGGGTAT CGCGTGCTCA CGCTCGGCTT CGCGATGCTC
GCGGCCGGCG TCGCGATCGC CGCCGCGCTC GCCCGCGACG GCGCGCCGGG GCCCGGCTTC
TATGCGGGCA TCGCGGCGAT CGGCATCGGG CAAGGGCTCG TGCTGCCGTC GGTCGTGCGG
ATCGTACTCG CGGAAGTCGA TGCGGCCCGC GCGGGAGTCG CGTCCGGGAT GGTCAGCGCG
ATGCTGCAGA TCGGCGCGGC GGTCGGCGCC GCGACGATCG GCGGCGTGTT CTTCGCGCGG
CTCGGCGTGC ATCCGGCCGC GCTCGATTAC GTGCAGGGCT TCAGGGCGTC GATGTTCACG
CTGACAATCG TGCTGCTGGG CTGCGTCGCG CTGTCGATGG CGCTCGGGCC GCTGCATCGG
CGGCTGCATG CGGATGCGTG A
 
Protein sequence
MTNNTLAPCA PACAAAAATP RSHHSWALVV LLVGAILPPL DYFIVNLALP AIRDGIGAHQ 
AELQLVVSAY ACANAVVQIT GGRLGDLYGR KRMFMIGMAG FVLASTLCGL ADNGTVLVGG
RVLQGLFAAI LAPQVLATIR SVFSPQEQVR VMGFYGFAFG LAAVIGQLGG GALISLHPFG
LGWRAIFLVN LPIGILALIG SWRFIPENRA PRGQRIDVPG TVLMSLFLLM LVYPLTHGRE
AGWPLWMIAC GVGALPMLGA LLAVEARRLA RGHDPLLDVR LLRNPVVALG LLLAFLFYTL
SAFFLSYGIY LQGCLNWSPL ASGFAILPLG LGFLASPLLT TRLVARFGGY RVLTLGFAML
AAGVAIAAAL ARDGAPGPGF YAGIAAIGIG QGLVLPSVVR IVLAEVDAAR AGVASGMVSA
MLQIGAAVGA ATIGGVFFAR LGVHPAALDY VQGFRASMFT LTIVLLGCVA LSMALGPLHR
RLHADA