Gene Bcenmc03_5488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5488 
Symbol 
ID6128298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2629545 
End bp2629967 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content67% 
IMG OID641652578 
Productendoribonuclease L-PSP 
Protein accessionYP_001779105 
Protein GI170737845 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.236112 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAG CCGTGAATCC CCCGGAAGTC TGGGCGCCGT TCGGCGCGTT TTCGATGGCC 
GTGATCCAGG GCGACGGGCG GATCGTGCAT CTGAAGGGAC AGGTCGCGCT CGACCGAGAC
GGGCAGCCAG TCGGCGCCGG CGACATGCGC GCCCAGGTCC GGCAAACGCT CGACAACATC
CGCGACGTGC TGGCCGCGCT GGGCGGGCAG TTGCGCGACG TGATCTCGCT CGTCCATTAC
GCCACCGACA TCGATGCGTT CATGCAGGCC GGCGACATCC GCAAGACCTA CTTCGCCGAA
CCCTATCCGG TGACGACGAC CGTCCAGGTC GAACGTCTCT ACCATCCCGA CCTGCTGATC
GAGATCGCGG CCATCGCCGA GATTCCGCTG GCGCGGTTTC GTCGGCCCGA GAGCGCCGCG
TGA
 
Protein sequence
MAEAVNPPEV WAPFGAFSMA VIQGDGRIVH LKGQVALDRD GQPVGAGDMR AQVRQTLDNI 
RDVLAALGGQ LRDVISLVHY ATDIDAFMQA GDIRKTYFAE PYPVTTTVQV ERLYHPDLLI
EIAAIAEIPL ARFRRPESAA