Gene Bcenmc03_5485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5485 
Symbol 
ID6128295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2625689 
End bp2626402 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content68% 
IMG OID641652575 
ProductDNA-binding response regulator CreB 
Protein accessionYP_001779102 
Protein GI170737842 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.631221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAGC CCACCATCCT GATCGTCGAA GACGAACAGG CGATCGCGGA CACGATCGTC 
TATGCCCTCG GCACCGACGG CATGCAGACC GTCCACTGCA CGCTCGCGCA GGCGGCGCTC
GACCGCCTGC GCGACACGCA TGTCGATCTC GTGGTGCTCG ATGTCGGCCT GCCGGACCTC
AGCGGCTTCG AGGTATGCCG GCGGCTGCGC ACGTTCACCG ATATTCCGGT GATCTTCCTG
ACCGCGCGGC ACGACGAGAT CGACCGGATC GTCGGGCTCG AGATCGGCGC CGACGATTAC
GTCGTCAAGC CGTTTTCGCC GCGCGAACTG GCCGCGCGGG TCCGCGTGAT CCTGCGCCGC
TTTCACCGGA CGGCCGCACC GGAACCGGCG CCCGCACCCG CTTCGGCCGA CGCGCCGGCA
CCGGTCGCCT CCGGCTTCAC GCTCGACACC GACGGCGCGC GCGTGTCGTG GCTCGGCCAC
GCGCTGGACC TCACGCGCTA CGAATTCGGG CTGATGGTGC TGCTGGTCCG GCATCCGGGG
CGCATCTACT CGCGCGAACA ATTGATGGAT CTCGTGTGGC ACGAGGCGCT CGATTCGGCC
GACCGCACGG TCGACACGCA CATCAAGACG CTGCGCGCCA AGCTGCGCGC GATCGATCCC
GAGCGCGACC CGATCCGCAC GCATCGCGGC ATGGGTTATT CGCTGCAACC GTAA
 
Protein sequence
MTQPTILIVE DEQAIADTIV YALGTDGMQT VHCTLAQAAL DRLRDTHVDL VVLDVGLPDL 
SGFEVCRRLR TFTDIPVIFL TARHDEIDRI VGLEIGADDY VVKPFSPREL AARVRVILRR
FHRTAAPEPA PAPASADAPA PVASGFTLDT DGARVSWLGH ALDLTRYEFG LMVLLVRHPG
RIYSREQLMD LVWHEALDSA DRTVDTHIKT LRAKLRAIDP ERDPIRTHRG MGYSLQP