Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5471 |
Symbol | |
ID | 6128281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 2612046 |
End bp | 2612738 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641652561 |
Product | peptidase M15D vanX D-ala-D-ala dipeptidase |
Protein accession | YP_001779088 |
Protein GI | 170737828 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2173] D-alanyl-D-alanine dipeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0406777 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCCGCTA CCGTGATACC GCTCTCCGAT CCCGCCGTCC GCTCGATCGC CCTGCAAGAG TCACACGAAG GGTTCGTCGA TCTCGCAGGC TTCCATGACC GCATCGCCGT CGATCTCGAC CGCCGCGATA TCGAAAGCAG GAGCCCGCAT TTCCTGAAAG TGCGTCGCAG TGTGGCGGAA CGGCTGATCG CCGCCGCGCA CGCGTTGCCC GCCGGCCTGC GCCTGTACGT CAAGGAAGGC TATCGCCCGC TGGCCCTGCA GCGCCGGTCC TTCACCGAGC ATCTCGCGCA TCTGCGCCGG ACGCTGAATC CGCTGCCGGA CGAAGACACC CTGGTCGCCC TGACCAGCCA CTACGTCGCA CTGCCGGAAG TCGCCGCCCA TCCGACGGGC GCCGCCATCG ACCTCACGCT GATCTCGGCG GAAGGCATCG AGATCGACAT GGGCACCATC ATGAACGCCA CCGACCAGGA ATCGTCCGGC GCGTGCTACA CGCACAACAC ATTCATCAGC CGCGCGGCCG CGCGAAACCG CCAGATCCTG ATCGGCGCGC TGACCCGCGC CGGCTTCACG AATTACCCGT CCGAATGGTG GCATTGGTCG TTCGGCGACC GCTATTGGGC CGTCATGCAG AACGAATCAC ACGCAATTTA CGGTCCCGTC GAGGAAAGCA TGCTCGACGA AGCGTCGCGA TGA
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Protein sequence | MPATVIPLSD PAVRSIALQE SHEGFVDLAG FHDRIAVDLD RRDIESRSPH FLKVRRSVAE RLIAAAHALP AGLRLYVKEG YRPLALQRRS FTEHLAHLRR TLNPLPDEDT LVALTSHYVA LPEVAAHPTG AAIDLTLISA EGIEIDMGTI MNATDQESSG ACYTHNTFIS RAAARNRQIL IGALTRAGFT NYPSEWWHWS FGDRYWAVMQ NESHAIYGPV EESMLDEASR
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