Gene Bcenmc03_5471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5471 
Symbol 
ID6128281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2612046 
End bp2612738 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content65% 
IMG OID641652561 
Productpeptidase M15D vanX D-ala-D-ala dipeptidase 
Protein accessionYP_001779088 
Protein GI170737828 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2173] D-alanyl-D-alanine dipeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0406777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCGCTA CCGTGATACC GCTCTCCGAT CCCGCCGTCC GCTCGATCGC CCTGCAAGAG 
TCACACGAAG GGTTCGTCGA TCTCGCAGGC TTCCATGACC GCATCGCCGT CGATCTCGAC
CGCCGCGATA TCGAAAGCAG GAGCCCGCAT TTCCTGAAAG TGCGTCGCAG TGTGGCGGAA
CGGCTGATCG CCGCCGCGCA CGCGTTGCCC GCCGGCCTGC GCCTGTACGT CAAGGAAGGC
TATCGCCCGC TGGCCCTGCA GCGCCGGTCC TTCACCGAGC ATCTCGCGCA TCTGCGCCGG
ACGCTGAATC CGCTGCCGGA CGAAGACACC CTGGTCGCCC TGACCAGCCA CTACGTCGCA
CTGCCGGAAG TCGCCGCCCA TCCGACGGGC GCCGCCATCG ACCTCACGCT GATCTCGGCG
GAAGGCATCG AGATCGACAT GGGCACCATC ATGAACGCCA CCGACCAGGA ATCGTCCGGC
GCGTGCTACA CGCACAACAC ATTCATCAGC CGCGCGGCCG CGCGAAACCG CCAGATCCTG
ATCGGCGCGC TGACCCGCGC CGGCTTCACG AATTACCCGT CCGAATGGTG GCATTGGTCG
TTCGGCGACC GCTATTGGGC CGTCATGCAG AACGAATCAC ACGCAATTTA CGGTCCCGTC
GAGGAAAGCA TGCTCGACGA AGCGTCGCGA TGA
 
Protein sequence
MPATVIPLSD PAVRSIALQE SHEGFVDLAG FHDRIAVDLD RRDIESRSPH FLKVRRSVAE 
RLIAAAHALP AGLRLYVKEG YRPLALQRRS FTEHLAHLRR TLNPLPDEDT LVALTSHYVA
LPEVAAHPTG AAIDLTLISA EGIEIDMGTI MNATDQESSG ACYTHNTFIS RAAARNRQIL
IGALTRAGFT NYPSEWWHWS FGDRYWAVMQ NESHAIYGPV EESMLDEASR