Gene Bcenmc03_5465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5465 
Symbol 
ID6128275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2606513 
End bp2607526 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content68% 
IMG OID641652555 
Productmonosaccharide-transporting ATPase 
Protein accessionYP_001779082 
Protein GI170737822 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.050328 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGC CTGATTCTTC TTCCACGCCT TCCACGACGC TCGCGGCCAC CGCCGGAAAC 
GGCGACGCGC CGCCGCCCCG CGCGATGTGG GCGCAGTTGC GCCGCTCGAC GCTGTTCTAT
CCGCTCGTCG GCCTGATCGT CGTGTGCATC GCGATGATGA TCGCGAGCCC CAGCTTCCTG
TCCGCCGCGA ACCTCGAGAA CGTGCTGCGC CAGGTGTCGA TCAACGCGAT CATCGCGGTC
GGCATGACCT GCGTGATCCT GACCGGCGGG ATCGACCTGT CGGTCGGCTC GGTGATGGCG
CTGTCGGGCA CGCTCGCGGC CGGGTTGATG GTCGCGGGCG TCAACGCGGT CGCCGCGCTG
GCGATCGGCA TCGCGGTCGG CCTCGGCTTC GGCTTCCTGA ACGGCGTGTT CGTCGCGTTC
GCCGGGATGC CGCCGATCAT CGTCACGCTC GCGACGATGG GCATCGCACG CGGCCTCGCG
CTGATCTACA CGGGCGGCTA TCCGATCGAC GGGCTGCCCG ACTGGGTCGC GTTCTTCGGC
AGCGGCAAGG TGCTCGGCAT CCAGGCGCCG GTGCTGATCA TGCTGGTGGT CTATGCGATC
GCGTGGCTGC TGCTCGACCG GATGCCGTTC GGCCGCTACG TGTATGCGAT CGGCGGCAAC
GAGCAGGCGA CGCGGCTCAC CGGCGTGCGA GTCGCGCGCG TGAAGCTGAT CGTCTACACG
CTGGCCGGGC TCACGTCGGC GCTCGCCGCG ATCGTGCTGA CCGGACGCCT GATGAGCGGG
CAGCCGAACG CGGGCGTGGG CTTCGAACTC GACGCGATCG CGGCCGTCGT GATGGGCGGC
ACGTCGATCT CCGGCGGGCG CGGGGCGATC CTCGGCACGC TGGTCGGCGC GCTGCTGCTC
GGCGTGCTCA ACAACGGGCT CAACATGATC GGCGTGAACC CGTATGTGCA GAACGTGATC
AAGGGCGGAA TCATCCTGCT CGCGATCTAC ATCAGCCGTG AGCGATCGCG GTAA
 
Protein sequence
MNLPDSSSTP STTLAATAGN GDAPPPRAMW AQLRRSTLFY PLVGLIVVCI AMMIASPSFL 
SAANLENVLR QVSINAIIAV GMTCVILTGG IDLSVGSVMA LSGTLAAGLM VAGVNAVAAL
AIGIAVGLGF GFLNGVFVAF AGMPPIIVTL ATMGIARGLA LIYTGGYPID GLPDWVAFFG
SGKVLGIQAP VLIMLVVYAI AWLLLDRMPF GRYVYAIGGN EQATRLTGVR VARVKLIVYT
LAGLTSALAA IVLTGRLMSG QPNAGVGFEL DAIAAVVMGG TSISGGRGAI LGTLVGALLL
GVLNNGLNMI GVNPYVQNVI KGGIILLAIY ISRERSR