Gene Bcenmc03_5464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5464 
Symbol 
ID6128274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2605006 
End bp2606526 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content67% 
IMG OID641652554 
ProductABC transporter related 
Protein accessionYP_001779081 
Protein GI170737821 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.146779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACGA TACTCAGGCT CAGCCACATC ACGAAAAGCT TTCCCGGCGT GAAGGCGCTG 
TCCGACATCG ATCTGGAAAT CGCGCGCGGC GAGATCCATG CGCTGCTCGG CGAGAACGGC
GCGGGCAAGT CGACGCTGAT GAAGATCCTG TGCGGCATCC ACCAGCCGGA TGCCGGTACG
ATCGAGATCG ACGGCGCCGC GCGCCATTTC GCGGATTATC ACGACGCGGT CGCGGCCGGC
GTCGGCATCG TGTTTCAGGA GTTCAGCCTG ATTCCGCACC TCGATGCCGT CGACAACCTG
TTCCTCGGCC GCGAGCTGCG CAATCGCTGG GGCGCGCGCG ACCGCAAGCG GATGCGCGCG
GCGGCCGCGG CCATCTTCGC GCGCCTGGGC GTGGCGATCG ATCTGGATGC GCCGATCCGT
ACGCTGTCGG TCGCGCAGCA GCAGTTCGTC GAGATCGGCA AGGCGCTGTC GCTCGACGCG
CGCATCCTGA TCCTCGACGA ACCGACCGCG ACGCTTACGC CGGCCGAGGC CGAGCACCTG
TTCGCGATCA TGCGCGAGCT GAAGCGGCAG GGCGTCGCGA TGATCTTCAT CTCGCATCAC
CTCGACGAAA TCTTCGTGGT GTGCGACCGC ATTACGGTGC TGCGCGACGG CCAGTACGTC
GCGACGACCG AGGTCGCGCG CACCGACGTC GAGCAACTGG TGCGCATGAT GGTCGGTCGC
CGGATCGAAA GCAGCTTTCC GCCGAAGCCG GTATTGCCGG CCGACGCGCC GGCCGTGCTC
GAAGTCGATG CGCTGCAGAT CGAGCGCGAC GGCCCGGTGA ACCGCTTCGC GCTGCGTGAA
GGCGAGATCC TCGGTTTCGC GGGGCTCGTC GGTTCGGGAC GCACCGAAAC CGCGCTCGCG
GTGATCGGCG CGACGCGCGC GCATCGCAAG GAACTGCGCG TGCGCGGCGC GGCGGCGAAG
CTCGCCGATC CGGCCGATGC GTTGCGCGCG GGCATCGGCA TTCTGCCGGA AAGCCGCAAG
ACGGAAGGGC TCGTCACGTC GTTCTCGATT CGCGACAACA TCTCGCTGAA CAACCTCGGC
AAGTACCGGT CGATGCGCTG GCTGATCGAC CGGCGCGGCG AAGCGCGCAC CACGCACGAC
GTGATGCGGC GCGTCGGCGT GAAGGCGCCG TCGATCCACA CCGAGGTCGC GACGCTGTCC
GGCGGCAACC AGCAGAAGGT CGTGATCGCG CGCTGGCTGA ACCATCACAC GTCGGTGCTG
ATCTTCGACG AGCCGACGCG CGGCATCGAC GTCGGCGCGA AAGCCGAAAT CTACGGGCTG
ATGCGCGAAC TCACCGCGCG CGGCTACGCC ATCATCATGA TCTCGTCCGA ATTGCCGGAA
ATCGTCGGCA TGTGCGATCG CGTCGCCGTG TTCCGGCAGG GCCGCATCGA GGCGACGCTC
GAAGGCGACG AGATCGATCC CGACACGGTC ATGACCTATG CCACGGCCGG CACGCGAGGA
GCGACCCATG AACCTGCCTG A
 
Protein sequence
MDTILRLSHI TKSFPGVKAL SDIDLEIARG EIHALLGENG AGKSTLMKIL CGIHQPDAGT 
IEIDGAARHF ADYHDAVAAG VGIVFQEFSL IPHLDAVDNL FLGRELRNRW GARDRKRMRA
AAAAIFARLG VAIDLDAPIR TLSVAQQQFV EIGKALSLDA RILILDEPTA TLTPAEAEHL
FAIMRELKRQ GVAMIFISHH LDEIFVVCDR ITVLRDGQYV ATTEVARTDV EQLVRMMVGR
RIESSFPPKP VLPADAPAVL EVDALQIERD GPVNRFALRE GEILGFAGLV GSGRTETALA
VIGATRAHRK ELRVRGAAAK LADPADALRA GIGILPESRK TEGLVTSFSI RDNISLNNLG
KYRSMRWLID RRGEARTTHD VMRRVGVKAP SIHTEVATLS GGNQQKVVIA RWLNHHTSVL
IFDEPTRGID VGAKAEIYGL MRELTARGYA IIMISSELPE IVGMCDRVAV FRQGRIEATL
EGDEIDPDTV MTYATAGTRG ATHEPA