| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5456 |
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| Symbol | |
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| ID | 6128266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 2596234 |
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| End bp | 2597655 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641652546 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001779073 |
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| Protein GI | 170737813 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.373718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.24303 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCATT GCTGTCAGCT GAGCATGTCG GGCCCGCGGG ATGTCGAACG GCTGGTGAGC
GCGCTGCCGT TCATCGCGGT CCGGCACCAT CCCGTCGCGC CGTCGCGGCC GCTCGTCTAC
CTGTCGCAGC AACACGATGC TGCGCTCGTC GATGTGCTCG CGTCGCGCGG CTGGGACGTA
TGGCGCGCCA AAACCGTCGC GGACGCGCTG AATCTCGTCA AGGCGAACCG TCCACATGCG
GGCATCGTCG ATTTCGACAG CTTCGCGTCG CCGGACGTCG CGTCGTTCGA GGCGCTGCTG
CGTGACCCGC GGGTCGGCTG GGTCGCGCTC GCCGACGGCG AACGGCTGCG CAACATCACG
ATCGCGCGCC TGATCCGCCA CTGCTGCTTC GACTACGTGC GCAATGCGGC GGCCTACACG
ACGATCGGCT ATCTCGTCGG CCATGCGTAC GGGATGCTGA AACTCGCGGA CGGCGACCCG
GCCGCGGAGG CGCCGCCGCC CGGCGGCGCG ATGATCGGCG CGTGCGGCGC GATGCGCCGG
CTGTTCGCGA CGATCCGCAA GGTCGCGAAC ACCGAGGCGA CCGTGTTCAT CGCCGGCGAA
TCCGGCACCG GCAAGGAATT GACGGCGGCG GCGATCCATC GGCAATCGTC GCGTGCCGAC
GCACCGTTCG TCGCCGTGAA CTGCGCGGCC ATCCCGACGA CGCTGCTGCA GGCCGAACTG
TTCGGCCACG AGCGCGGTGC GTTCACGGGC GCGCACCAGC GCAAGATCGG CCGCATCGAG
GCCGCGCACG GCGGCACGCT GTTTCTCGAC GAAATCGGCG ACATGCCGTT CGAGAGCCAG
GCGAGCCTGC TGCGGTTCCT GCAGGAAGGC AAGATCGAGC GGCTCGGCGG GCATGCGTCG
ATTCCGGTCG ACGTGCGGAT CGTGTCGGCG ACCCACGTCG ATCTCGAGGC CGCGATGCAG
GCCGGGCGAT TCCGCGCCGA CCTGTATTAC CGCCTGTGCG TGCTGCGGAT CGACGAGCCG
CCGCTGCGCA TGCGCGGCCG CGACATCATG CTGCTCGCCG ACGACGTGCT GCGGCGCTAT
CGCGACGACG GCTCGTACCG GATTCGCGGC TTCACGCCGT GCGCGATCGA GGCGATCCAC
AACTATCCGT GGCCCGGCAA CGTGCGCGAG CTGATCAACC GGATCCGCTT CGCGGTCGTG
ATGACGAACG GCCCGCTGAT CTCGGCCGCC GATCTCGAAT TGCGTCCGTA CACGTCGCTG
CGGCCGCCGA CGCTCGCGCA GGCGCGCCGG CAGGCCGAGC GGCACGCGAT CGAGGAAACG
CTGCTGCGTC ACCGCCACCA GCATGCGGAC GTCGCGGCGG AGCTCGGCAT CTCGCGCGCG
ACGCTGTACC GTCTGATGAT CGCGCACGGG CTGCACAGCT GA
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| Protein sequence | MNHCCQLSMS GPRDVERLVS ALPFIAVRHH PVAPSRPLVY LSQQHDAALV DVLASRGWDV
WRAKTVADAL NLVKANRPHA GIVDFDSFAS PDVASFEALL RDPRVGWVAL ADGERLRNIT
IARLIRHCCF DYVRNAAAYT TIGYLVGHAY GMLKLADGDP AAEAPPPGGA MIGACGAMRR
LFATIRKVAN TEATVFIAGE SGTGKELTAA AIHRQSSRAD APFVAVNCAA IPTTLLQAEL
FGHERGAFTG AHQRKIGRIE AAHGGTLFLD EIGDMPFESQ ASLLRFLQEG KIERLGGHAS
IPVDVRIVSA THVDLEAAMQ AGRFRADLYY RLCVLRIDEP PLRMRGRDIM LLADDVLRRY
RDDGSYRIRG FTPCAIEAIH NYPWPGNVRE LINRIRFAVV MTNGPLISAA DLELRPYTSL
RPPTLAQARR QAERHAIEET LLRHRHQHAD VAAELGISRA TLYRLMIAHG LHS
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