Gene Bcenmc03_5446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5446 
Symbol 
ID6128256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2585404 
End bp2585802 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content60% 
IMG OID641652536 
Productwinged helix family two component response transcriptional regulator 
Protein accessionYP_001779063 
Protein GI170737803 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.149365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0360801 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTGCA AATACCTGTA CATCGACAAC ATAAAAATCA ACTTCGTGCG CCGCACGATC 
GAAATCGACA ACAAGGTCGT TGACGTTACG CCGCGCGAAT TCGACGTCGT CGAATTCCTG
CTCGACAACA TGAACAAGAT CGTGCCGCGG CAGGCAATCC AGGAAGCCGT GTGGGGCCGT
GAGCTCGGCG TGTCGTCACG CACGCTCGAC ACCCATATCT CGCGAATCCG TTCGAAGCTG
CAACTCGAAC ACGACAAGAA CCTGCGGATC ATCCCGATCT ACGCGGTCGG CTATCGGCTG
GTGCTGTTCG GTGCGGCGAT GACGCACGTC GAGCGCCACG ACGCGGCGCC GGTGCTGCGC
GCGGCGCCCC AAGCCGCGAT GGCCGCCGAC TACGCGTAA
 
Protein sequence
MDCKYLYIDN IKINFVRRTI EIDNKVVDVT PREFDVVEFL LDNMNKIVPR QAIQEAVWGR 
ELGVSSRTLD THISRIRSKL QLEHDKNLRI IPIYAVGYRL VLFGAAMTHV ERHDAAPVLR
AAPQAAMAAD YA