Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5437 |
Symbol | |
ID | 6128247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 2562400 |
End bp | 2563776 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641652527 |
Product | type III secretion apparatus H+-transporting two-sector ATPase |
Protein accession | YP_001779054 |
Protein GI | 170737794 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family [TIGR02546] type III secretion apparatus H+-transporting two-sector ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0824968 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.11706 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCGC CGCTCGATGA TCCGCCACCG TTCGGCGACG ACGACGGCGC GCCGTTCGAT CGCGGCCGCC TGGTCGGCGA ACTCGACGCG GGGCTCGCGT TCTTCTCGCC GGTGTCGGTG CAGGGCCGCG TCAACCACGC AGTCGGGCAG ATATTGAACG CGACGGGCAT CCGCGCGCGG CTCGGCGAGA TTTGCGAGCT GCGCACGCCG AACCAGCCGA CGCTGCTCGC GGAGGTGGTC GGCTTCTCGC GGCAGACGAC GCTGCTCACG CCGCTCGGCG ACGTGGCCGG GCTGTCGCCG GAGACGACCG TCGTGCCGTC CGGACGCGAG CATGTGTTCC CGGTGGGCGA GGCGCTGTTC GGCCGCGTGC TCGACGGGCT CGGCCGGCCA CTCGACGATC GCGGGCCGGT GACCGGCGCC GCGTGGGTCT CAACGCAGCA GGACCCGCCG AATCCGCTCG CGCGCAAGAT GATCGACACG CCGTTTCCGA CCGGCGTGCG CGTGATCGAC GGGCTGATGA CGCTCGGCAT CGGGCAGCGC GTCGGCATCT TCGCGCCGTC CGGCGTCGGC AAGAGCACGC TGCTCGGGAT GATCGCGCGC GGCGCGCAGG CCGACGTGAA CGTGATCGCG CTGGTCGGCG AACGCGGCCG CGAGGTGCGC GAATTCATCG AGCACAGCCT GTCGCCCGAG GTGCGCGCGC GGTCGATCGT CGTCGTGTCG ACATCCGATC GCCCCGCGAT GGAGCGCGTG AAATCCGCGC TGGTCGCGAC CGCGATCGCC GAGCACTTCC GCGATGCGGG CAAGCGCGTG CTGCTGCTGG TCGATTCGCT GACGCGCTTC GCCCGCGCGC AGCGCGAAGT CGGCCTCGCG AGCGGCGAGC CGCCGACGCG GCGCAGCTTC CCGCCGTCGA CGTTCGCGGT ATTGCCGCGC CTGCTCGAAC GCGCGGGGCA GGGGGCGCAC GGGTCGATCA CCGCGCTCTA CACGGTGCTC GTCGAAGGCG ACGAGGAATC TGACCCGATC GCCGAGGAGG TGCGTTCGAT CCTCGACGGC CACATCGTGC TGTCGCGCAA GATCGCGCTC GCGAACCGCT ATCCGGCGAT CGACGTGCTC GCGAGCCTGT CGCGCGTGAT GCCGCTCGTC GCGAGCCGCG CGCACCAGCA TGCGGCCGCG CGCGTGCGTG AGCTGATCGC GAAGTACCAG GAGATCGAGC TGCTGGTGCA GATCGGCGAG TATCGCGAAG GCAGCGACCG GCTCGGCGAT CTCGCGCTGC GCGCGCGCGA CGCGATCGGT GCGTTCTGTG CGCAGGCGTC GGACGAGGAC GTGCGCTTCG ACGCGCTGCT CGCGAAGCTG ACGAAGCTGG CGAACGATCA TGTCTGA
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Protein sequence | MNAPLDDPPP FGDDDGAPFD RGRLVGELDA GLAFFSPVSV QGRVNHAVGQ ILNATGIRAR LGEICELRTP NQPTLLAEVV GFSRQTTLLT PLGDVAGLSP ETTVVPSGRE HVFPVGEALF GRVLDGLGRP LDDRGPVTGA AWVSTQQDPP NPLARKMIDT PFPTGVRVID GLMTLGIGQR VGIFAPSGVG KSTLLGMIAR GAQADVNVIA LVGERGREVR EFIEHSLSPE VRARSIVVVS TSDRPAMERV KSALVATAIA EHFRDAGKRV LLLVDSLTRF ARAQREVGLA SGEPPTRRSF PPSTFAVLPR LLERAGQGAH GSITALYTVL VEGDEESDPI AEEVRSILDG HIVLSRKIAL ANRYPAIDVL ASLSRVMPLV ASRAHQHAAA RVRELIAKYQ EIELLVQIGE YREGSDRLGD LALRARDAIG AFCAQASDED VRFDALLAKL TKLANDHV
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