| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5434 |
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| Symbol | |
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| ID | 6128244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 2560159 |
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| End bp | 2561046 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641652524 |
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| Product | YscJ/HrcJ family type III secretion apparatus lipoprotein |
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| Protein accession | YP_001779051 |
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| Protein GI | 170737791 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.119544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0656048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGA TCGATTCGAC GCCGCGCATG CATGCGTGGC GCAGCCGGGC GGCGCGCGCG
CTGCTCGCGG GGCTGCTCGT GCTGTTGGCC GGGTGCCAGA AGGAGTTGTA CTCGGGCCTG
TCGGAGCGCG ACGCGAACCA GATGGTCGCG GTGCTCGGCG ACGCGGGCAT CAGCGCGTCG
AAGGACAACG ATGCGCGCGA CACGTCGGAC CGCAATGCGT GGCTCGTGAG CGTCGCGGAC
GGCGACATGC AGGCGGCGCT CACGGTGCTG CAGGCGAACG GGCTGCCGAA GCCGAGCTAT
GCGAGCCTCG GCGAGCTGTT CCAGAAGCAG GGCCTCGTGT CGACGCCGGC CGAGGAGCGC
GTGCGCTACC TGTACGGCGT GTCGCAGGAT CTGTCGCGCA CGCTGCAGGA CATCGAGGGC
GTGGTGGTCG CGCGCGTGCA GGTCGTGATT CCGGAGAACG ATCCGCTCGC GGACAAGATC
AAGCCGTCGT CGGCCGCGGT GTACATCCGC TACCGGCCGG GCGTCGACCT GCGCGCGATG
GCGCCGATGG TCAAGGATCT CGTCGCGCAC AGCATCGAGG GGCTGCAGTA CGACAACGTG
TCGCTGTTCC TGCAGCCGGC CGCCGCGCGC GCGACGCGCG TGGACGGGAT CGGCAGCGCG
GTGTCGGACA TCCTGCGGCT GCGCTCGCCG CTCGGCTGGC TCGTGTTCGC GCTGATCCTG
CTGACCTGCG CGGTGATCGC GCTGTCGGCC GCGCGGCGCG GGATGTTCGG CGCGCGGCTC
GCGGGCCTGC TCGGTGCGCC GCGCGGGGCG AGCGGGAGCG GTGGTACGAC CGCGCAGCAG
GCCGGCGGCG GACTGCGTAC GCCGGACGGC GCGCGCGACG GCGCATGA
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| Protein sequence | MTTIDSTPRM HAWRSRAARA LLAGLLVLLA GCQKELYSGL SERDANQMVA VLGDAGISAS
KDNDARDTSD RNAWLVSVAD GDMQAALTVL QANGLPKPSY ASLGELFQKQ GLVSTPAEER
VRYLYGVSQD LSRTLQDIEG VVVARVQVVI PENDPLADKI KPSSAAVYIR YRPGVDLRAM
APMVKDLVAH SIEGLQYDNV SLFLQPAAAR ATRVDGIGSA VSDILRLRSP LGWLVFALIL
LTCAVIALSA ARRGMFGARL AGLLGAPRGA SGSGGTTAQQ AGGGLRTPDG ARDGA
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