Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5429 |
Symbol | |
ID | 6128239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 2555485 |
End bp | 2555763 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641652519 |
Product | HrpO family type III secretion protein |
Protein accession | YP_001779046 |
Protein GI | 170737786 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4794] Type III secretory pathway, component EscS |
TIGRFAM ID | [TIGR01403] type III secretion protein, HrpO family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.751272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.141963 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAGCT CGACGATCCT CGACCTGACG CGCCAGGCGC TGATGCTCGT GCTGCTGCTG TCGCTGCCGA TCGTGCTGAT CGCGACCGTC ACGGGCCTCG TCGTCGCGAT CCTGCAGGCC GTCACGCAGG TGCAGGACGC CAACATCGGC ATCGCGGTGC GGCTGATCGC CGTGATGGTC GCGCTCGTGC TGCTGTCCGG CTGGCTCGGC GGCGAAGTGC TGCGCTTCGC GCAGCAGGCG CTGGAACGCA TGTTCGTTTC TTCCACAGGA GTTCTTTGA
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Protein sequence | MTSSTILDLT RQALMLVLLL SLPIVLIATV TGLVVAILQA VTQVQDANIG IAVRLIAVMV ALVLLSGWLG GEVLRFAQQA LERMFVSSTG VL
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