Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5426 |
Symbol | |
ID | 6128236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 2550996 |
End bp | 2551904 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641652516 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_001779043 |
Protein GI | 170737783 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.967948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.221919 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATA TTGCATTGCA TGAAGAAGCG GTCGCCCCAA CCACCTTGCC GCGCGCGTCG CGCGGATTGA ACGCATGCGC GGACGCGCTG CGCGAGCGCC CCGTGCAGGT CGTCTGGTGC GACGACGTGA AGCGCGGCGA CGATGCGCAG CCGCACGCAC CGAAGCTCGG CGTCGCCGAT ACGCTCGCGC ACGCGCAGAG CACGGCCGAG CGCAACCGGA TCGTCACGAG CCTGCTGCAT CTGACAGGCT TCTCGACGTT CGCGTACTTC GCACTCGAAT TCGCGCGCGA GCGCGTCGAA AGCCTCTACC TGCACGAAGC GTTCACGCCG GCCACCTATC GCGGCGACTA CGTGCGGCAC AACCATCACG ACGTCGATCC GCGCACGCTC GGCGCGCGCG TGTGCAACAT GCCGATCGTG TGGGACCTGC AGCAATTGCG CCGCGAGCAC CGCGAGCGCG ACGACGCGCC GTCCGTGAGC CCGGCCGCGC TCGACGGCTT CCTGCAGACG ATGCAGGACG ACGGGATGTG CAGCGGCATC ATGTATTCGA TGGCCGTGCC CGGCACGCGG CTGCACGCGT TCATGAGCTT CACCGCGCCG CGCCGCACGC GCGAATGGAT CACGCCGGCG ACGATCGAGC AGGCGCTGTC GATCGGGCTG TCGGTCCACA AGTTCGCATC GCCGCAACTG ATCTCGACGT CGCGCGAACG CGCGGTGAAC GGGCTCACGC CGTTCGAGCA GGAACTGCTG CTCGGCATCG CCGAAGGTGC GTCCGACAAG GAAATCGGCC GGCGCCTCGA CACCAGCGCG CACAACGTCG ACTATCACCT GCGCAAGCTG CGCAAGCGCT TCGGCGTCGC GAACCGGATT CAGCTCACGT ACCTGACGTC GAAGCTCGAG CTGATCTAA
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Protein sequence | MSDIALHEEA VAPTTLPRAS RGLNACADAL RERPVQVVWC DDVKRGDDAQ PHAPKLGVAD TLAHAQSTAE RNRIVTSLLH LTGFSTFAYF ALEFARERVE SLYLHEAFTP ATYRGDYVRH NHHDVDPRTL GARVCNMPIV WDLQQLRREH RERDDAPSVS PAALDGFLQT MQDDGMCSGI MYSMAVPGTR LHAFMSFTAP RRTREWITPA TIEQALSIGL SVHKFASPQL ISTSRERAVN GLTPFEQELL LGIAEGASDK EIGRRLDTSA HNVDYHLRKL RKRFGVANRI QLTYLTSKLE LI
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