| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5420 |
|---|
| Symbol | |
|---|
| ID | 6128230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 2543530 |
|---|
| End bp | 2544138 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641652510 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001779037 |
|---|
| Protein GI | 170737777 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.66162 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTTT CGCCGCGCAA GGCGCCGCGC CAGCGCCGCT CGGTGGCCAC CGTCGATGCG
ATCGTCGAGG CGGCCGCCCG CATTCTGGAG CGCGACGGCT TCGCCGGTTA CACGACGAAT
GCGGTCGCGG CGCTGGCCGG CGTGAGCATC GGCTCGCTCT ATCAATACTT CCCGAACCGC
GATGCGCTGA CGGCCGCGCT CGTCGAGCGC GAGAGTGCGC ATCTGCTCGA CGACGTCGAC
CGGGCGGCCG CGCTGTCGTC CTGCGACGAC GTGCTGCGCG CGCTGGTGCG CGGGGCCGTC
GCGCACCAGA TGCGCCGGCC GGTGCTCGCG CGGCTGATCG ATTTCGAAGA GGCGCGGTTG
CCGCTCGGTG CGCGCACCGA GCGGGTCGCG GATCGCATCC ACGCAACCTT GCTGCATGCG
CTCCGGTTGC GCGATGCGCC GCGCGTCGCC GCGCCCGACG TGGTCGCGCA CGATCTGCTC
GCGATCGTGA AAGGCATCGT CGATGCGGCG GGCGCGCGCG GCGAAACCGA TGCGAACGCG
CTCGAAACGC GTGCGTGGCG GGCGGTGCGC GGTTATCTCC GGGAGTCGCG CGAATCGAAA
CTTGCTTGA
|
|---|
| Protein sequence | MLLSPRKAPR QRRSVATVDA IVEAAARILE RDGFAGYTTN AVAALAGVSI GSLYQYFPNR
DALTAALVER ESAHLLDDVD RAAALSSCDD VLRALVRGAV AHQMRRPVLA RLIDFEEARL
PLGARTERVA DRIHATLLHA LRLRDAPRVA APDVVAHDLL AIVKGIVDAA GARGETDANA
LETRAWRAVR GYLRESRESK LA
|
|---|
| |