Gene Bcenmc03_5404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5404 
Symbol 
ID6128214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2529644 
End bp2530558 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content70% 
IMG OID641652494 
ProductDNA-binding transcriptional regulator LysR 
Protein accessionYP_001779021 
Protein GI170737761 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGC ACCGTCATAT CGAGGTGTTC CGCGCGCTGA TGGTCACCGG CAGCACGACG 
CGCGCGGCCG AGATGCTGTA CACGTCGCAG CCGACCATCA GCCGCGAACT GGCGCGGATG
GAGCAGGTCG TCGGCTTTGC GCTGTTCGAA CGCGCGCACG GCCGACTGCG CCCGACGATG
GCCGCGCTCA CGCTGTTCGA CGACGTGCGG CTCGCGTATG TGGGGCTCGA ACGCGTCGCG
GCGACGGCTG CACGCCTGCG CGAGTTTCGC GACGGGCAAC TGTCGGTGAT CGCGCTGCCG
GCGTTCTCGC ACGCGATCCT CCCCGGTGCG TGCCGGCGCT TTCACGATGC GCATGCGGGC
GTCAGCGTGT CGGTCGCGAC GCAGGAGTCG CCGGTGCTCG AGGAGTGGTT GACCGCCCAA
CGCTACGACC TCGGGCTGAC CGAGCACGAT GTCGCGCCGG CCGGCACGGT GCTCACGCCG
CTGCTCGAAG TCGATGAAGT GTGCGTGCTG CCCGACGGCC ATCCGCTGCT CGCGCAGGAC
GCGATCGACC TGCTGGATCT CGTCGACCGC CCGTTCGTGA GTCTGTCGCT GAACGATCCG
TACCGCATCA TGATCGACGA GGCATTCGCG CAACTCGGCG TCGCGCCGCG CTCGGTGGTC
GACACGCCGT CGGCCGTCTC GGTGTGCGCG TTCGTGCGGC AGGGGCTCGG GGCTGCGATC
GTCAATCCGC TCACGGCGCT CGATTTCGTC GGCCGCGGCC TGCACGTGCG GCCGCTGACG
CGGTCGTTTC CGTACCGGGT CAGCGTGATC GTGCCCGAGC ACCGGCCGAA GAGCCTGCTC
GTCGACGCGT TCGCCGATGC GCTGCGCGGC GAAGCGAAGG CGATCCGCCG CCGGCTCGCC
GCACACCTCG GCTAG
 
Protein sequence
MLTHRHIEVF RALMVTGSTT RAAEMLYTSQ PTISRELARM EQVVGFALFE RAHGRLRPTM 
AALTLFDDVR LAYVGLERVA ATAARLREFR DGQLSVIALP AFSHAILPGA CRRFHDAHAG
VSVSVATQES PVLEEWLTAQ RYDLGLTEHD VAPAGTVLTP LLEVDEVCVL PDGHPLLAQD
AIDLLDLVDR PFVSLSLNDP YRIMIDEAFA QLGVAPRSVV DTPSAVSVCA FVRQGLGAAI
VNPLTALDFV GRGLHVRPLT RSFPYRVSVI VPEHRPKSLL VDAFADALRG EAKAIRRRLA
AHLG