| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5400 |
|---|
| Symbol | |
|---|
| ID | 6128210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 2524140 |
|---|
| End bp | 2525573 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641652490 |
|---|
| Product | putative nicotinate phosphoribosyltransferase |
|---|
| Protein accession | YP_001779017 |
|---|
| Protein GI | 170737757 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACG ATCCCGGCGG CTTTGCCGCG GTTCTCGCCA ATCCGATTCT CAACACGGAT
TCGTACAAGG CTTCCCACTT CCTGCAGTAT CCGCCGGACG CATCGGCGAT GTTCTCGTAC
GTCGAATCGC GCGGCGGCCG CTACGACCGC ACGCTGTTCT TCGGCCTGCA GATGCTGCTG
AAGGAGTATC TGTGCAAGCC CGTGACGCAC GCGATGATCG ACGACGCGCG CGATTTCTTC
ACCGTGCACG GCGAGCCGTT CAACGAAGCA GGATGGCGTC ATATCGTCGA GCACTACGAT
GGCTACCTGC CGGTGAAGAT CCGAGCGGTG CCGGAAGGCT CGATCGTGCC AGTGCACAAC
GTACTGGTGA CGGTCGAATG CGACGATCCG CAGGTGTTCT GGCTCGCGTC GTATCTCGAG
ACGATGCTGT TGCGCATTTG GTATCCGGTG ACGGTAGCGA CCCGGAGCTG GCATCTTCGT
CAAACGATTC GCCGTTTCCT CGAACGGACC GACGACGATC TCGCGCAATT GCCGTTCAAG
CTGCACGACT TCGGCGCACG CGGCGTGTCG AGCGCGGAAT CGGCCGCGAT CGGCGGCGCC
GCGCACCTCG TGAGCTTCAT GGGCTCGGAC ACGGTGCTCG GCGTGCTGGC CGCGAACCGC
TTCTATCGCG AGCCGATGGC CGCGTACTCG GTGCCGGCGG CCGAGCACAG CACGATCACG
TCGTGGGGGC GCGAAGGCGA GGCCGATGCA TACCGCAACA TGATCAAACG CTTCGGGTTG
CCGGGCGCGA TCGTATCGGT CGTGTCGGAC TCCTACGATC TGTTCGCCGC GCTCGATCTG
TGGGGCGGCG AACTCCGGCA GGCGGTGATC GATTCGGGCG CGACGCTCGT CGTGCGCCCC
GATTCCGGCG ACCCGGTGAC GATCGTGCTG CAGACCGTGC GGGCGCTCGA TGCGTCGTTC
GGTTCGACGG TGAACGGCAA GGGGCGGCGC GTATTGAATC GTGTGCGCGT GATCCAGGGG
GACGGGGTCG ACGAGCAGTC GATCGAAGCG ATCCTCGTCG CGCTCGACGA GGCGGGCTAT
GCGGCCGGCA ACGTGGTGTT CGGCATGGGT GGTGCGTTGT TGCAGCGGGT GAACCGCGAT
ACGCAGCGCT TCGCGATGAA GTGTTCGGCG ATCCGGCGCG GCGACTTGTG GCACGACGTC
CGCAAGAATC CGGTCACCGA TCAGGGCAAG CGTTCGAAGC AGGGGCGGTT GACGCTGCTG
CGCAATTGGC GCACCGGCGA GTATCGGACG GTGACGCTGC CGGTTGCGTG GGACGATCGT
GCGCTGGAAG GCGAATGGGG CGAGGCGCTC GAGACGGTGT TCGACACGGG GCGCCTGCTC
GTCGATACGT CGTTCGCCGA GGTCAGGGCG AGGGCGCATG CGGGGGAGGT GTGA
|
|---|
| Protein sequence | MQNDPGGFAA VLANPILNTD SYKASHFLQY PPDASAMFSY VESRGGRYDR TLFFGLQMLL
KEYLCKPVTH AMIDDARDFF TVHGEPFNEA GWRHIVEHYD GYLPVKIRAV PEGSIVPVHN
VLVTVECDDP QVFWLASYLE TMLLRIWYPV TVATRSWHLR QTIRRFLERT DDDLAQLPFK
LHDFGARGVS SAESAAIGGA AHLVSFMGSD TVLGVLAANR FYREPMAAYS VPAAEHSTIT
SWGREGEADA YRNMIKRFGL PGAIVSVVSD SYDLFAALDL WGGELRQAVI DSGATLVVRP
DSGDPVTIVL QTVRALDASF GSTVNGKGRR VLNRVRVIQG DGVDEQSIEA ILVALDEAGY
AAGNVVFGMG GALLQRVNRD TQRFAMKCSA IRRGDLWHDV RKNPVTDQGK RSKQGRLTLL
RNWRTGEYRT VTLPVAWDDR ALEGEWGEAL ETVFDTGRLL VDTSFAEVRA RAHAGEV
|
|---|
| |