| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5361 |
|---|
| Symbol | |
|---|
| ID | 6128171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 2486776 |
|---|
| End bp | 2487345 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641652451 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001778978 |
|---|
| Protein GI | 170737718 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.000465127 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0688552 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGCGT GCTCTCCCAC GCTGCAATAC AGACACCCCT TCGTCTGTGG ACGCTCGCCC
GTCAACTTGA CAATCAGCTG TCCATTACGT AAAATGGTTG TCAATTTACG ATCCGAGCTG
GACATGACGA AATCCGACAA GTTGACCGCC GTCGCGCTGT CCGTATTCCG GTTGAACGGC
CTGCTGATCG AATGGGGCAA CACCTTCGCC GGGCCGCACG GCTTGACCAG CGCGCGCTGG
CAGGTGCTGG GCGCGATCTC GATGGCGCCG GACGCGCCGA ACATCCCGCA GATCGCCGAC
ACGATGGGCA TCACGCGGCA GGCCGTCCTG AAACAGATCA ACGTGCTGAC CGACGAAGGG
CTGGTGCTGT CGTTGCCCAA TCCGGCGCAC AAGCGCTCGC CGTTGTATGC GCTGACGCCG
CGCGGCGAAG CGGCCTATCA GGCCGTGGTC GAGCAGTGGC AGCGGCATGT CCGCGACATC
GCCGGCGACT TCAGCTCGAC CGACCTCGAC GCGGCGCTGC GCGTGCTGTC GGCGATGTCC
GGCGCGCACG GCCAGGACGG CCACGCGTAG
|
|---|
| Protein sequence | MFACSPTLQY RHPFVCGRSP VNLTISCPLR KMVVNLRSEL DMTKSDKLTA VALSVFRLNG
LLIEWGNTFA GPHGLTSARW QVLGAISMAP DAPNIPQIAD TMGITRQAVL KQINVLTDEG
LVLSLPNPAH KRSPLYALTP RGEAAYQAVV EQWQRHVRDI AGDFSSTDLD AALRVLSAMS
GAHGQDGHA
|
|---|
| |