| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5354 |
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| Symbol | |
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| ID | 6128164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 2472819 |
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| End bp | 2479916 |
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| Gene Length | 7098 bp |
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| Protein Length | 2365 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641652444 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_001778971 |
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| Protein GI | 170737711 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0199943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.02642 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATTG CGCGTTCGAA AAAAGCGGGT GAGCCGTTTC CGAGACTGCT GTTGCCCACG
GGCGTGTTTC TGGCGCTGTC GGGCGCGGGC ATCGTTCCCG CCCACGCGAC CTGCAGCACG
GCGGGCACCA CGGTGACCTG TTCCGGCGTC GCGAATCCGC TGGCGCCCAG TTATTCGAAC
AGCGCCAACA ACGTGAACGC GACGGTCAAC CCCGGTGCAA GCGTCGGCGT GCTGCTCGGC
GTCGGCGGCA CGGCGATGTC GCTGACCGGC AATAACGTCA CGCTGACCAA CAACGGCACG
ATCGACCCGT CGGCGCTCGG CTCGGGGCTC GGCGTGCTGT CGAGCGGCAC GGTGGTCGGC
AACGCGGCGG CGAGCACCAC GACCGTGACC AACAACGGCA CGATGATGGG CTCGACCGGC
GTGGCGATCA GCGGCGTGAC GGGCATGGCG CTGTCGGTTC AAAACGGCGC GGGCGGCACG
TCGACGATTA CGAACACGGG TACGATCGGC TCCTCCCCGC TGGTCGGCGC GACGCTGACC
GGCGCCGATG CGCCGGTGGT CGCCGCGTAC GGCGGCGGCA CGGTCAACAT GTCGAACAGC
GGAACGATCA CCGGTCGCGT GTCGTTGGGG TCGAGCGGCA CACCGGGGCA GGGCAATACG
TTCACCAACT CGGGCACGAT CAACGGCGGC GTGTCGATGG GGGTGAACAG CACGAATACG
TTCAATGCCG TGACGGGCTC GTCGGTCAAC ACGGCCGGCG GCACCGGCGG CGCATTCAAC
ATCACGGTCG GGCCGATCAC GCTCGGCGTG GCGGCAACCG GCGTGGTCGA CGGCGGCGCG
GGCGGCAACA ACACGCTCAA CCTGCAGCAG GGAACTGCGG CGAACGGCAC GATCGCGGCC
AACAACTACA TCAACTTCAA TCACCTCGAC GTCACGAGCG GCAACTGGAC GATCAACGGC
GCGTCCACCG CGCAGGACGC GACGCTGTCG GGCGGCGTGG CGGTCATCAA CGACAACGCG
TCGCTCGGCA CCGGTACCGT CACGGGCAAC GGCGGCGCGT TGCAGGCCGG CACGACGGGG
CTCAACGTCT CCAACAACGT GTCGCTTGGC GCGGGCGGCC TGACGGTGCA GGGTGCGACC
GGGCTGACGC TGTCCGGCAC AGTGTCGGGG GGCGGCGCGT TGACAAAGAA CGATGGCGGC
ACGCTGACGC TGTCCGGCGC GAACAGCTAC ACAGGCGCCA CGAACCTGAA TGCCGGCGGC
CTGGTGGTCG GCAACAATTC GGCGCTCGGC ATCGGCGCGC TGAACGTCAA CGCGTCGGCG
TCGCTCGACG CGAGCACGAA CGTGACGCTC GGCAACACGG TCAATCTTGC CACCGGCTCG
ACGCTGACGC TCGGCGGCAG CAACGCTCTC GGGCTGACCG GCACGATCAG CGGCAGCGGC
GGCCTCACGA AGAACGGCGC GGCGACCACG ACGCTGAGCG GCGTGAATAC GTATACGGGC
GATACGACCA TCAACAGCGG CACGCTCGCG CTGAACGGAG CCGGCAGCCT GTCGGCGACC
GGCACGGTCA ACCTGACCGG TGCGGGCGCA ACGTTCGACG TGACCGGTGC GTCGGGCGCG
CGGACCATCG GCTCGCTGGC CGGCGCGGCC GGCACGAACG TGACCCTTGG CGCCAATTCG
CTGACGCTCA ACGGCAGTGG CAATGCGACC TATGCCGGCA CGATCGGCGG GTCCGGCAGC
GTGACGCTGT CGGGTACCGG CACGCAATCG CTGACGGGCA CGAACGTGTA CACCGGCGGC
ACCAACCTGA ACGGCGGCAA CCTCGTCGTC GGCAGCAATA CGTCGCTCGG CATCGGCGCG
GTGAACGTGA ACGGCTCGTC GACGCTCGAT GCGACCACCA ACGTGACGCT CGCGAACGGC
GTCAACCTCG CGACGGGCAC GACGCTGACC CTTGGCGGTA GCACCGACCT CGGCCTCGGC
GGCGTGGTTT CCGGCGGTGG CGGTCTCGTG AAGAACGGTG CGGCGACGCT CACGCTGTCG
GGCGCGAACA ACTATGCAGG CGGCACGACG CTGAATGCCG GCGGACTGGT GCTCGGCAAC
GGCTCGGCGC TCGGCACCGG CGCGCTGACC GTCGGCGGCT CGGCGACGCT CGATACGAAC
ACGAACCTCA CGGTCGGCAA CGCGATCAAC CTCACGACGG GCAATACGCT GACGCTCGGC
GGCAGCAACG CGCTCGGGCT GAGCGGTGCG ATTTCCGGCA CGGGCAGCCT CGTGAAGAAC
GGCGCGGCGA CCACGACGCT GACGGGCGCG AACACGTACA CGGGCGGCAC GACGATCAAT
GCCGGCACGC TGGCGATCGG CGCGGGCGGC AGCCTGTCGT CCACGGGGAC GGTGAACCTG
GTCAATCCGG GGGCCGCACT GGACATCAGC GCGGGCAGCG CGCAGTCGAT CGGCGCGCTG
TCGGGCGCCA TCGGCACGAG CGTGAGCCTC GGCGCCAACG CACTGACGCT GGGCGGGACC
GCGAGCGGCA CGTTCAGCGG CACGATCGGC GGCACCGGCA GCCTGACGCT GGCGGGTACC
GGCACGCAGA CGCTGAACGG CGCAAATACC TACACCGGCG GGACGAATCT CAATAGCGGC
AGCCTCGTGC TCGGCAACAA CGGGGCACTC GGCTTCGGTG CGCTGAACGT CGGCGGCGCG
GCCACGCTCG ATACGAATGC GACCTTGTCG GTTGGCAATG CAATCAATCT CGGCACGGGC
GCTGCACTGA CGCTGGGGGG GAGCAACAAT CTCCCACTGG GCGGCGCGAT TTCCGGCGCG
GGCAGCCTCG TGAAGGACGG TGCGGCCACC ACCACGCTGA CCGGCGTGAA TACCTACACG
GGCGGCACGA CGGTCAACGG CGGCACGCTG GCGATCGGCG CGGGCGGCAG TCTCGCGTCG
ACCGGCACGA TGAACCTCGC AGGCGCCGGT GCGATGCTGG ACCTGAGCGC CGCGACGGGC
GGCCAGACGC TCGGTGCGCT GTCGGGTGTC ACGGGCACGA ACCTCAACCT CGGCGGCAAC
GCGCTGACGC TGGGCGGGAC CGCCAGCGGC ACGTTCAGCG GCGCGATCGG CGGCACCGGC
AGCCTGACGC TCGCGGGCAC CGGCACGCAG ACGCTGAACG GCGCGAGCAC CTATTCCGGC
GGGACGAACC TCAATAGCGG CGGCCTGGTG CTCGGCAACA ATGGGGCACT CGGCTTCGGT
GCGCTGAACG TCGGGGGCGC GGCCACGCTC GATACGAATG CGACCTTGTC GGTCGGCAAT
GCGGTCAATC TCGGTACGGG CGCCGCGCTG ACGCTGGGCG GCAGCAACAG TCTCACGCTG
GGCGGTGCGA TTTCCGGTGC GGGCAGCCTC GTGAAGGACG GTGCGGCCAC CACCACGCTG
ACCGGCGCGA ATACCTACAC GGGCGGCACG ACGATCAACG CAGGGACGCT GGCGGTGAGC
GCGGGCGGCA GCCTCGCATC GACCGGCGCG ATGAACCTGG CAGGCGCCGG CGCGACGCTC
GATCTGAGTG CCGCGACGGG CGCACAAACG CTCGGCGCAT TGTCGGGTGT CGCGGGAACG
AGCCTCAACC TCGGCGGCAA CGCACTGACG CTGGGCGGTA CGGCCAGCGG CACGTTCGGC
GGGGTGATCG GCGGCACCGG CGGTCTCACG TTGTCGGGCA CCGGCACGCA GACGCTGTCC
GGCGCGAACA CCTATACGGG CGGCACGACG ATCAACAGCG GCAGCACGCT GGCACTCGGC
GCGGGCGGCA GCCTGGCGTC GACCGGCACG GTGAACCTGA CCGGGTCGGG CGCGACGTTC
AACCTGAGCG GCGCATCGGG CGCGCAGACG ATCGGCGCAC TGACCGGCGC GGCCGGCACG
AACGTGAACC TCGGCGGCAA CGGGCTGACG CTGAGCAGCG CGGGCAACTA TGCGTTCGGC
GGCGCGATCG GCGGCACGGG CGGCCTGACG CTGGCCGGCG CGGGTACGCA AACGCTGACG
GGCGCGAACA CCTACACGGG CGGGACGACG ATCGGCGGCG GCAGCACGCT CGCACTCGGC
GCAGGCGGCA GCCTCGCCGC GACCGGCGCC GTGAACCTCG CGGCCGCGGG GGCGACGTTC
GACGTGAGCG GCGCGTCGGG CGCGCAGACG ATCGGCGCGC TGACCGGCGC GGCCGGCACG
AACGTGGCGT TGGGCGCGAA TGCGCTGACG CTGAACGGCA GCGGCAACAA CACGTTCGGC
GGCGCGATCG GCGGAACGGG CGCGGTGACG TTCGCCGGCA CGGGCACACA GACGCTGACG
GGGGCGAACA CGTACACGGG CGGCACGACG ATCGGCGGCG GCAGTACGCT GGCGCTCGGC
GCGGGCGGCA GCCTTGCATC GACGGGCGCG GTGAACCTCG CGGGCGCGGC TGCGACGTTC
GACGTGAGCG GTGCGACGGG CGCGCAAACG GTCGGCGCGC TGACCGGCGC AGCCGGCACG
AACGTGAATC TCGGTGCGAA TGCGCTGACG TTGAACGGCA GCGGCAACGG TACGTTCGGC
GGCACGATTG GCGGAACGGC AGGCGTGACG GTCGCCGGCA CGGGTACACA AACGCTGACG
GGCGCGAACA CGTACACGGG CGGCACGACG ATCAACGGCG GCAGCACGCT TGCGCTGGGA
GCCGGTGGCA GTCTTGCGTC CGGTAGCGCG GTGAATCTCG CGGGCACCGG CGCCACGTTC
GACGTGAGCG GCTCGACCGG CACGCAAACG ATCGGAGCGC TGTCGGGCGC AGCCGGTACC
AACGTGAATC TCGGCGCGAA TGCGCTGACG CTGAACGGCA GCGGCAACAC CACGTTCGGC
GGCACGATCG GCGGAACGGG CGGTGTGACG CTGGCCGGCA CCGGCACGCA GACGCTGACG
GGCGCGAACA CGTACACGGG CGGCACGACG ATCAACGGCG GCAGCACACT CGCACTCGGC
GCGGGCGGCA GCCTCGCCTC GACGGGCGCG GTGAATCTCG CGGGCACCGG CGCCACGTTC
GACGTGAGCG GTGCCACCGG CACGCAAACG GTCGGTGCGC TGTCGGGCGC GGCCGGCACG
AACGTGAATC TCGGTGCGAA TGCACTGGCG TTGAACGGCA GCGGCAGCAG TACGTTCGGC
GGCACGATCG GTGGCGCGGG CGGTGTGACG GTGGCGAGCG GCACGCAGGT GCTGACCGGC
GACAACACGT ACACCGGCGG CACCACGATC GCGGCCGGCG GCACGCTGCA ACTCGGCAAC
GGCGGCACGT CGGGCAGCGT GGCCGGCAAC GTCGTCGACA ACGGTGCGCT GATCGTCAAT
CAATCGGGCA ACGTGACGAT CGCGAGCGTG CTGTCCGGCA CCGGCTCCCT CACCCAGGCC
GGCAGCGGAC GACTGACCCT GACCGGCACG AGCACGCTGA GCGGCCCGAC CACGGTCGGC
GCGGGCACGC TGGCCGTCAA CGGTTCGCTC GGCCAGTCGA CCGTCACCGT GCAGAACGGC
GCGACGCTGA CGGGTACCGG CACGATCGGC GGTCTCGTGG TGCAGGGCGG CGCGACGGCG
GCCGCCACGC AACCGGGCGC GGCGCTGAAC GTGGGCGGCA ACGTCACGTT CCAGCCGGGT
TCGACGTTCC AGGTCGCCGC CACGCCGCAG CAAAGCGGCA GTCTCGCGGC GAGCGGCACG
GCGACGCTGA ACGGCGGCAC CGTACAGGTG CTCGCGAACC AGAGCGGCTA TCAGCCGAGC
ACGACGTACA CGATCCTCAG CGCGTCGTCG GGCGTGCAGG GCGCGTTCAC CCAGGTGAGC
GCGAACTACG CGTTCCTGAC GCCGACCCTC AGCTACGATC CGGGTCACGT CTATCTGCGG
CTGGTTCAGA ACGGCACGTC GCTGCCCGAC GTCGCGACGA CGCCGAACCA GCGCTCGGTC
GCGACCGCGG TGGCCGCGCT CGGCGCCGGC AATCCGCTGT ACGACACGGT GCTGACGACC
GACGCGCCGA CCGCACGCCG TGCGTACGGG CTGCTCGGCG GCGAACTGCA GGCGAGCCTG
AAGAGCATGC TGCTGATCGA CAGCCGCTAT GTGCGCGACG CGGTGACCGA TCGCGTCCGT
CAGGGCCTCG CGCCCGGGTC GGGCCCGCTC GCGGCGCTGT CGTCGGGCGG CGCCGCGCTG
TGCGGCGACA ACACGGCCGG CGTGGTCGAC CCGACGCTGC CGCCGGAACG CCGGATCGGT
TCGCGCGACG GGTGCTACGG CGGCACGCCT TATCAGCCGG TCGTCTGGGG GCAGGCGTTC
GGCGGCCGCA GCCGGCTCGC CGGCGACGGC AATGCGTCGT CGATCAACCG CAGCATGACG
GGCTTCATCG CCGGCGCCGA CATGGCGCTC AACGACAAGT GGCGCGCGGG TCTGGCCGCG
GGCGTCACGC ACAGCTCGCT CGACAACGAC CAGAGTTCGT CGGCAGCGGT GAACAGCTAC
TACCTGTCGC TGTACGGCGG CGCGCAGTAC GGCGCGCTCG GCGTGCGCGG CGGCGCGTCG
TACACGTGGT ATCGCATCAA CAGCGACCGC TATCCGGGCT TCGCGGGCTT CTCGGATCAC
GATTCGGCCG GCTACAACGC GAATTCGGCG CAGGTGTTCG GCGAAGTCGG CTACGCGCTG
CCGGTCGGGC CGGTCGCGAT CGAGCCGTTC GCGGGCCTCG CGTATGTGAA CCTGCATACC
GACGGCTATA CCGAAAGCGG CGGCGCGGCG GCGCTGCGTG CCGGCGGCGA GACGACCCAC
GTCGGCTTCT CGACGCTCGG CCTGCGCGCG GCGTCGCAGC TCGGCTCGAT CGCGAGCGGC
ACGTTCACCG CGCGCGGGAC GGTCGGCTGG CGGCATGCGT TCGGCAACGT GCGGCCGTCG
TCGGCGTTCA CGTTCGCGAA CGGCGGCACG TCGTTCCAGG TGTCGGGCGT GCCGATTGCG
CGCGACAGCG CGGTGCTCGA AGCCGGCATC GACGCGAACA TCACGAAGCG CCTGACGCTC
GGCCTCACGT ACAGCGGCCA GTACGGCAGC GGCGTGCGCG ACAACGCGAT CCTCGGCAAC
ATCCTGTGGA AATTCTGA
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| Protein sequence | MTIARSKKAG EPFPRLLLPT GVFLALSGAG IVPAHATCST AGTTVTCSGV ANPLAPSYSN
SANNVNATVN PGASVGVLLG VGGTAMSLTG NNVTLTNNGT IDPSALGSGL GVLSSGTVVG
NAAASTTTVT NNGTMMGSTG VAISGVTGMA LSVQNGAGGT STITNTGTIG SSPLVGATLT
GADAPVVAAY GGGTVNMSNS GTITGRVSLG SSGTPGQGNT FTNSGTINGG VSMGVNSTNT
FNAVTGSSVN TAGGTGGAFN ITVGPITLGV AATGVVDGGA GGNNTLNLQQ GTAANGTIAA
NNYINFNHLD VTSGNWTING ASTAQDATLS GGVAVINDNA SLGTGTVTGN GGALQAGTTG
LNVSNNVSLG AGGLTVQGAT GLTLSGTVSG GGALTKNDGG TLTLSGANSY TGATNLNAGG
LVVGNNSALG IGALNVNASA SLDASTNVTL GNTVNLATGS TLTLGGSNAL GLTGTISGSG
GLTKNGAATT TLSGVNTYTG DTTINSGTLA LNGAGSLSAT GTVNLTGAGA TFDVTGASGA
RTIGSLAGAA GTNVTLGANS LTLNGSGNAT YAGTIGGSGS VTLSGTGTQS LTGTNVYTGG
TNLNGGNLVV GSNTSLGIGA VNVNGSSTLD ATTNVTLANG VNLATGTTLT LGGSTDLGLG
GVVSGGGGLV KNGAATLTLS GANNYAGGTT LNAGGLVLGN GSALGTGALT VGGSATLDTN
TNLTVGNAIN LTTGNTLTLG GSNALGLSGA ISGTGSLVKN GAATTTLTGA NTYTGGTTIN
AGTLAIGAGG SLSSTGTVNL VNPGAALDIS AGSAQSIGAL SGAIGTSVSL GANALTLGGT
ASGTFSGTIG GTGSLTLAGT GTQTLNGANT YTGGTNLNSG SLVLGNNGAL GFGALNVGGA
ATLDTNATLS VGNAINLGTG AALTLGGSNN LPLGGAISGA GSLVKDGAAT TTLTGVNTYT
GGTTVNGGTL AIGAGGSLAS TGTMNLAGAG AMLDLSAATG GQTLGALSGV TGTNLNLGGN
ALTLGGTASG TFSGAIGGTG SLTLAGTGTQ TLNGASTYSG GTNLNSGGLV LGNNGALGFG
ALNVGGAATL DTNATLSVGN AVNLGTGAAL TLGGSNSLTL GGAISGAGSL VKDGAATTTL
TGANTYTGGT TINAGTLAVS AGGSLASTGA MNLAGAGATL DLSAATGAQT LGALSGVAGT
SLNLGGNALT LGGTASGTFG GVIGGTGGLT LSGTGTQTLS GANTYTGGTT INSGSTLALG
AGGSLASTGT VNLTGSGATF NLSGASGAQT IGALTGAAGT NVNLGGNGLT LSSAGNYAFG
GAIGGTGGLT LAGAGTQTLT GANTYTGGTT IGGGSTLALG AGGSLAATGA VNLAAAGATF
DVSGASGAQT IGALTGAAGT NVALGANALT LNGSGNNTFG GAIGGTGAVT FAGTGTQTLT
GANTYTGGTT IGGGSTLALG AGGSLASTGA VNLAGAAATF DVSGATGAQT VGALTGAAGT
NVNLGANALT LNGSGNGTFG GTIGGTAGVT VAGTGTQTLT GANTYTGGTT INGGSTLALG
AGGSLASGSA VNLAGTGATF DVSGSTGTQT IGALSGAAGT NVNLGANALT LNGSGNTTFG
GTIGGTGGVT LAGTGTQTLT GANTYTGGTT INGGSTLALG AGGSLASTGA VNLAGTGATF
DVSGATGTQT VGALSGAAGT NVNLGANALA LNGSGSSTFG GTIGGAGGVT VASGTQVLTG
DNTYTGGTTI AAGGTLQLGN GGTSGSVAGN VVDNGALIVN QSGNVTIASV LSGTGSLTQA
GSGRLTLTGT STLSGPTTVG AGTLAVNGSL GQSTVTVQNG ATLTGTGTIG GLVVQGGATA
AATQPGAALN VGGNVTFQPG STFQVAATPQ QSGSLAASGT ATLNGGTVQV LANQSGYQPS
TTYTILSASS GVQGAFTQVS ANYAFLTPTL SYDPGHVYLR LVQNGTSLPD VATTPNQRSV
ATAVAALGAG NPLYDTVLTT DAPTARRAYG LLGGELQASL KSMLLIDSRY VRDAVTDRVR
QGLAPGSGPL AALSSGGAAL CGDNTAGVVD PTLPPERRIG SRDGCYGGTP YQPVVWGQAF
GGRSRLAGDG NASSINRSMT GFIAGADMAL NDKWRAGLAA GVTHSSLDND QSSSAAVNSY
YLSLYGGAQY GALGVRGGAS YTWYRINSDR YPGFAGFSDH DSAGYNANSA QVFGEVGYAL
PVGPVAIEPF AGLAYVNLHT DGYTESGGAA ALRAGGETTH VGFSTLGLRA ASQLGSIASG
TFTARGTVGW RHAFGNVRPS SAFTFANGGT SFQVSGVPIA RDSAVLEAGI DANITKRLTL
GLTYSGQYGS GVRDNAILGN ILWKF
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