Gene Bcenmc03_5353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5353 
Symbol 
ID6128163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand+ 
Start bp2471415 
End bp2472107 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content69% 
IMG OID641652443 
Producthypothetical protein 
Protein accessionYP_001778970 
Protein GI170737710 
COG category[S] Function unknown 
COG ID[COG2949] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00600694 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.075763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCGA CGACACCTGA GAGACCGAAT ACCTTGAAAT ATCGAACCAA ACGGAGCTTT 
GCGGCCCGGG CCGGCCGCGT GCTGGCCGTC GTTGCGTGCG TCTGGGCCGC GGCGGCCGCC 
GCGATCGTAA TCCATGGCAT GCGGATGCCG AGCGACCCGG CGGACGTCGC CGTGATCTTC 
GGCAACGCGC TCGACGACAC CGGCGCGCCG AAGCCCGTGC TCGCGGCCCG GCTCGATGTG 
GGCGTGCGCT GCTATCGCGC GGGGCAGTGC CCGGCGTTTC TGGTCAGCGG CGCGATCGAC 
GGCCCCGGGC TGAACGAGGC GACGGCGATG CGCGACTACC TCGTTGCGCG CGGCGTGCCG 
GCGGACCGGA TCGCCGTCGA CGACCAGGGC GACAACACGC TCGCGACCGC GCAGCACACG 
CTGGCCTACC TGCACGCGCA TCGCCTGTCC CGCGTGCTGA TCGTCAGCCA GTATTACCAC 
CTTGCGCGGG CGCGTCTCGC GTTCGAGCGC GTCGGCATTG CGCGGTCGAA CATCTCCGCC 
GCCTATCCGC GCCGCTTTCA GTGGCGCGAT GTCTATTCGA GCTGGCGCGA GGTGCCGGCC 
TACGCGGTGT ATGCGGTGCG GCTGTGGGTG AATCCGGATG CGCGGCCGGT TTCGTTTCGG 
CCGATGCTTT ATTTGATGCG GCTGTTTTCG TGA
 
Protein sequence
MRPTTPERPN TLKYRTKRSF AARAGRVLAV VACVWAAAAA AIVIHGMRMP SDPADVAVIF 
GNALDDTGAP KPVLAARLDV GVRCYRAGQC PAFLVSGAID GPGLNEATAM RDYLVARGVP 
ADRIAVDDQG DNTLATAQHT LAYLHAHRLS RVLIVSQYYH LARARLAFER VGIARSNISA 
AYPRRFQWRD VYSSWREVPA YAVYAVRLWV NPDARPVSFR PMLYLMRLFS