Gene Bcenmc03_5350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5350 
Symbol 
ID6128160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2466300 
End bp2467430 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content67% 
IMG OID641652440 
Producthistidine kinase 
Protein accessionYP_001778967 
Protein GI170737707 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.485302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0898754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGAC GAACCCGTTC GCACCCCGAT GCACCGCCGC TGCCCACGCT GCGCTACGTC 
AAATGGCGCT GGCTGCATTT CCGGCGCGCG TGGACCGACA CACGCGCCGA CCGCATACCG
AGCTGGTCGC GCCTGTACCT GCGCACCTAC CTGCATCTGC TCGGCCTCGT GTTGCTGACC
GCGCTGGTGC CCGCGCTCGC GCTGTGCGTC GAATTGTCGC CGCAGGTCGT ATGGCATGCG
TTCGACTCGC TGCCGGGCGA CATCTGGATC GTGCTCGCGT TCGTGTTTAC CGCGCCCGCG
CTCGCCGCGT ACCGGTGGAT GCGGCCGGTC TGGTCGGATC TCGTGATGGT GCGCGAGCGC
GCGATCGACT TTACCGGCGG GCGCTTCAAC ACGCGCGCGC GCGAATCGCA CAGCGTGATC
ATCGGCCCGC TGGCGCGCAC GCTGAATGCG CTCGCGATGC GCATGGAGCG GCTGATCGCC
GCGCAGCGCG ATCTGACCAA CGGGATCTCG CACGAGTTGC GCACGCCGCT CGCGCGCGTG
CGCTTCGCGC TCGAAATGCT GCGCGAACCG GGTTCGGCGG CCGAATACCA GGGCGCGCTC
GACAGCATCG CGCAGGACGT GACCGAGCTC GAGGAGCTGA TCGACATGAG CCTCACGTAT
GCACGGCTCG AATACAGCTC GCTGCAGTCG AACCTCGAGA TGACGGCGCC CGTCGCGTGG
TTCGAGCATC AGGTGAACGA CGCGCAACTG CTGTATCCGG ACCGGGCGAT CGAGTCGCGC
ATCGAGATCG GAGCGGATTT GCGCGTGAAG ATGGACCGGC GGCTGATGTC GTATGCGATG
CGCAACCTGT TGCGCAATGC GAGCAAGTAC GCGAAATCGC GGATCGTCGT TGGAATCTCG
CTCGTGCACG GCAACATCGG CATCTTCGTC GAGGACGACG GCCCCGGCGT GCCCGAGAGC
GAGCGCGAAC GGATCTTCGA CGCATTCGTG CGCCTCGACC GCCGCACCGG CGGCTACGGG
CTCGGCCTGT CGATCACGCG ACAGGTGCTC CACGCGCACA ACGGCCGGAT CGCGGTCGTC
GATCCGGTCG AACTCGGCGG CGCGCGATTC GAGATCAGCT GGCCGGTCTA G
 
Protein sequence
MIRRTRSHPD APPLPTLRYV KWRWLHFRRA WTDTRADRIP SWSRLYLRTY LHLLGLVLLT 
ALVPALALCV ELSPQVVWHA FDSLPGDIWI VLAFVFTAPA LAAYRWMRPV WSDLVMVRER
AIDFTGGRFN TRARESHSVI IGPLARTLNA LAMRMERLIA AQRDLTNGIS HELRTPLARV
RFALEMLREP GSAAEYQGAL DSIAQDVTEL EELIDMSLTY ARLEYSSLQS NLEMTAPVAW
FEHQVNDAQL LYPDRAIESR IEIGADLRVK MDRRLMSYAM RNLLRNASKY AKSRIVVGIS
LVHGNIGIFV EDDGPGVPES ERERIFDAFV RLDRRTGGYG LGLSITRQVL HAHNGRIAVV
DPVELGGARF EISWPV