Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5331 |
Symbol | |
ID | 6128141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 2447757 |
End bp | 2449136 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641652421 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_001778948 |
Protein GI | 170737688 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0147852 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATCA TGCATTCCTC CCCGCTTCAC CGTCTCGGCG CATTCGCGTG CGCGGCCGCA CTGCTCGCCG GCTGCGCGGG TGCGCGCCAT GATCCGCTGC CCGCCGTCGC GATGCCCGCG AACTGGGCCG CGCCGGTCGC GGCCGACGCG CCGGCCGCCA CGGGCGACTG GTGGCGCAGT TTCGGCGATC CGCAACTCGA CGCATTGATC GACGACGCGC TGCGCGCCAA CAACGATCTC GCGATCGCGG CGATCCGCGT GTATCGCGCA CAGTTGCAGG CCGGGCTCGT CGATACGAAC CTGACGCCCA ACGTGACGCT CGGCGCGAAC GGCGCCGTAT CGCATACGCT CGACACGCAC CAGATGAGCC GTTCGAGCGG TGTCAATGGT TCGCTCAGCT ATGAACTCGA CCTGTGGGGC CGGCTGGCCG CGCTGCGCGA CGCCGCGCAC TGGGAGGCCG ACGCGACCGC CGACGATCTG GAAGCCGCAC GGCTGTCGCT GATCGGCACG ACCGCGGCGC TGTACTGGCA GATCGGCTAT CTGAACCGGC AGATCGCGCT CGGCGACGCG AATATTGCGT ATGCGGAGCG CACGCTCGCG CTCGTGCGGT CGCGGCACAC GGCCGGCGCC GTGTCGGGGC TCGACCTCGC GCAGGCCGAA CAGAGCCTCG CCGCGCAACG CGCGGCGCAG ACGCAGCTGA TCCAGCAGCG CACCGAGAAC CGCCACGCGC TCGCGATCCT GTTCGACCGG CCGCCGCAGC AGCGCGCGGC CGAGCCGGCT GCGTTGCCCG ACGCCGCACC GCCCGACGTG GCGGCCGGCC TGCCCGCCAG CCTGCTCGGC CGGCGCCCCG ACCTGCGTGC GGCGGAATTC CGGCTGCGCG AATCGCTTGC GCAGGTCGAC GCGACGCGCA CCAGCTTCTA TCCGACCTTC ACGCTGACCG GCAGCGCCGG CACGACGAGC ACGAGCCTCG AGCGCGTGCT GACGAATCCG GTCGGCACGC TCGGGCTCGG CCTCGCGCTG CCGTTCATCC AGTGGAACAC GATGCAGTTG CAGATCAGGG TGTCGAAGTC GCAGTACGAG GAAGCGGTCG TCGGGTTCCG CCAGCGGCTC TACACGGCGC TCGCGGAAGT CGAGAACGCG CTGTCGGCGC GCGTGCAGCT CGAACGCGAA GCCGAACAGC GCGCGCTGTC GCTCGCCCAG GCCCAGCGCG CCGAACGGCT GGCCGCCGCG CGCTTCGCGG CCGGCGCGAC CGCCGTGCAG CCGTGGCTCG ATCAGCAGCA GGTGCTGCGG AGCGCACAAA GCGCCGACGA ACTGACGCGT CTGAACCGGC TCAACAACCA GATGAAGCTC TACCGCGCGC TCGGCGGCGG GACTTCCTGA
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Protein sequence | MAIMHSSPLH RLGAFACAAA LLAGCAGARH DPLPAVAMPA NWAAPVAADA PAATGDWWRS FGDPQLDALI DDALRANNDL AIAAIRVYRA QLQAGLVDTN LTPNVTLGAN GAVSHTLDTH QMSRSSGVNG SLSYELDLWG RLAALRDAAH WEADATADDL EAARLSLIGT TAALYWQIGY LNRQIALGDA NIAYAERTLA LVRSRHTAGA VSGLDLAQAE QSLAAQRAAQ TQLIQQRTEN RHALAILFDR PPQQRAAEPA ALPDAAPPDV AAGLPASLLG RRPDLRAAEF RLRESLAQVD ATRTSFYPTF TLTGSAGTTS TSLERVLTNP VGTLGLGLAL PFIQWNTMQL QIRVSKSQYE EAVVGFRQRL YTALAEVENA LSARVQLERE AEQRALSLAQ AQRAERLAAA RFAAGATAVQ PWLDQQQVLR SAQSADELTR LNRLNNQMKL YRALGGGTS
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