| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5329 |
|---|
| Symbol | |
|---|
| ID | 6128139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 2445083 |
|---|
| End bp | 2445988 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641652419 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001778946 |
|---|
| Protein GI | 170737686 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0884153 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0232804 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA GACTCGACGG CGTGACGACC TTCGTCCAGG TCGTGGAATC CGGCAGCTTC
GCGCTCGCCG CGGAACGGCT CGACATGACG CGCTCGGCCG TCGGCAAGGC GATCGCGCGG
CTCGAGAAGC GGCTCGGCGC GCGGCTGCTG CAGCGCACGA CGCGCAGCCA GAGCCTGACC
GACGACGGCC AGGCGTACTA CGACCGCTGC GTGCGCGCGC TGGCGGAACT GGAAGCGGCG
GAAGCCGATC TCGACTGCGG CCGCCACGAG GCGCGCGGCA AGCTGCGGCT GAGCGTGCCG
CTCGCATTCG GGCATCACTG CGTGACGCCG ATCGTGCTCG ACCTCGCGCG CACTTACCCG
CACCTGCGGA TCGACGTGTC GATCACCGAC CGTTTCGTCG ATCTCGTCGA GGAAGGGATC
GACCTCGCGG TGCGGATCGG CCCGCTCGCC GACAGCACGA GCCTCGCGGT GCGGCGGCTC
GGCACGCAAT ACGGGAGCCT CGGCGCGGCG CCGTCGTATC TCGCTCGCCA CGGCACACCG
CAATCGCTCG ACGATCTGAA AAACCACCGC ACGATCGCGT ATTCACGCTC GGGCGTCGTG
CAGCCGTGGT ACCTGCGTGC GCCGGACGGC TCGAGCGTCC ACATCGACAT GCCGCACCAG
CTCAGTTTCG ACGACGTGCA GGCGATCGCG GCGGCCGGTG CGTCGGGGTT CGGGATCGCG
TGGCTGCCGA GCTGGCTGCT CGATCACTAC GTGAAGCGCG GGGAGATGGT GGTCGTGCTC
GATCGCTGTT TCGTCTGCGA AGGCGACATT CATGCGATCT GGCCGAAAAC GCGCTACCTG
CCACGCAAGA CGCGCTGCGT GATCGATGCG CTCGTGGAGG CGGTACCGCC GATGATCGAG
CGCTGA
|
|---|
| Protein sequence | MTDRLDGVTT FVQVVESGSF ALAAERLDMT RSAVGKAIAR LEKRLGARLL QRTTRSQSLT
DDGQAYYDRC VRALAELEAA EADLDCGRHE ARGKLRLSVP LAFGHHCVTP IVLDLARTYP
HLRIDVSITD RFVDLVEEGI DLAVRIGPLA DSTSLAVRRL GTQYGSLGAA PSYLARHGTP
QSLDDLKNHR TIAYSRSGVV QPWYLRAPDG SSVHIDMPHQ LSFDDVQAIA AAGASGFGIA
WLPSWLLDHY VKRGEMVVVL DRCFVCEGDI HAIWPKTRYL PRKTRCVIDA LVEAVPPMIE
R
|
|---|
| |