Gene Bcenmc03_5322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5322 
Symbol 
ID6128132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2436295 
End bp2437329 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content70% 
IMG OID641652412 
ProductAraC family transcriptional regulator 
Protein accessionYP_001778939 
Protein GI170737679 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0019262 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00625276 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAGCAGG AAGACAAGGG AACCGTCGCG ATCAGCCTCG TCGCGCACAG CGTGTCGCTG 
GCCACGCGGC GCGGCGTCGC GGCCGAGCCG CTGCTCGCGC AGGCCGGCAT CGCGCCCGCG
CTGCTCGCGC AGCCGCGCGC ACGCGTGTCC GCGCAGCAAT ACGGCGCGCT GTGGAACGCG
ATCGCGCGCA CGCTCGACGA CGAGTTTTTC GGGCAGGATC GCCATCCGAT GCGCAGCGGC
AGCTTCATCG CGATGAGCCA GGCGGCGCTG TCCGCACGCG ACGGGCTGCA CGCGATGGCG
CGCGCGGTGA ACTTCATGCA CTGCGTGCTC GACGACCTGC ACGCGGAGCT CGACGCGAAC
CCGCAGCGCG TGCGGCTGCG TTTCGTGCAC CGCAACAACG GCGCGACGCC CGCGATGTTC
ACGTACGCGA CCTATTTCAT CATCGTGTAC GGGCTCACCT GCTGGCTGAT CGGCCGGCGC
ATACCGCTGC TGCACGCGAG CTTCCGCTGC GATACGCCGC CGGCCGACCA CGAATACCCG
TCGATGTTCT GCGACGACAT GCGGTTCAAC GAGCCCGATT CGTATGTCGA TTTCGATCCC
GAATTCGCGA CGCTGCCGGT CGTGCAGAAC GCGAAGACGC TGAAAACGTT CCTGCGCAAC
GCGCCGGCCA GCTTCATCGT CAAGTACCGC AACCCGAACG CGCTCGCGCA GCGGGTGCGC
GCGGTGCTGC GCGGAATGCC GCCCGCCGCG TGGCCGGGCG CGGGCGGGAT GGCCGCGCGG
CTGCACGTGG CCGAAGCCAC GCTGCGCCGC AAGCTGCATC AGGAAGGCCA CGCGTACCAG
TCGATCAAGG ACACGCTAAG GCGCGATCTC GCGTTCGAGG CGCTGGCCGA CCCGGCCCGC
ACGATCGCCG ACGTCGCGGC CGCGACCGGT TTCGCGGAGC CGAGCGCGTT CTACCGCGCG
TTTCGCAAGT GGAGCGGGCG CAGCCCGGCC GAGTTTCGGG AAGAAGCGCT CGCGCGCGGC
GGCGGCGCCG GCTGA
 
Protein sequence
MKQEDKGTVA ISLVAHSVSL ATRRGVAAEP LLAQAGIAPA LLAQPRARVS AQQYGALWNA 
IARTLDDEFF GQDRHPMRSG SFIAMSQAAL SARDGLHAMA RAVNFMHCVL DDLHAELDAN
PQRVRLRFVH RNNGATPAMF TYATYFIIVY GLTCWLIGRR IPLLHASFRC DTPPADHEYP
SMFCDDMRFN EPDSYVDFDP EFATLPVVQN AKTLKTFLRN APASFIVKYR NPNALAQRVR
AVLRGMPPAA WPGAGGMAAR LHVAEATLRR KLHQEGHAYQ SIKDTLRRDL AFEALADPAR
TIADVAAATG FAEPSAFYRA FRKWSGRSPA EFREEALARG GGAG