Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5322 |
Symbol | |
ID | 6128132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 2436295 |
End bp | 2437329 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641652412 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001778939 |
Protein GI | 170737679 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0019262 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00625276 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAGCAGG AAGACAAGGG AACCGTCGCG ATCAGCCTCG TCGCGCACAG CGTGTCGCTG GCCACGCGGC GCGGCGTCGC GGCCGAGCCG CTGCTCGCGC AGGCCGGCAT CGCGCCCGCG CTGCTCGCGC AGCCGCGCGC ACGCGTGTCC GCGCAGCAAT ACGGCGCGCT GTGGAACGCG ATCGCGCGCA CGCTCGACGA CGAGTTTTTC GGGCAGGATC GCCATCCGAT GCGCAGCGGC AGCTTCATCG CGATGAGCCA GGCGGCGCTG TCCGCACGCG ACGGGCTGCA CGCGATGGCG CGCGCGGTGA ACTTCATGCA CTGCGTGCTC GACGACCTGC ACGCGGAGCT CGACGCGAAC CCGCAGCGCG TGCGGCTGCG TTTCGTGCAC CGCAACAACG GCGCGACGCC CGCGATGTTC ACGTACGCGA CCTATTTCAT CATCGTGTAC GGGCTCACCT GCTGGCTGAT CGGCCGGCGC ATACCGCTGC TGCACGCGAG CTTCCGCTGC GATACGCCGC CGGCCGACCA CGAATACCCG TCGATGTTCT GCGACGACAT GCGGTTCAAC GAGCCCGATT CGTATGTCGA TTTCGATCCC GAATTCGCGA CGCTGCCGGT CGTGCAGAAC GCGAAGACGC TGAAAACGTT CCTGCGCAAC GCGCCGGCCA GCTTCATCGT CAAGTACCGC AACCCGAACG CGCTCGCGCA GCGGGTGCGC GCGGTGCTGC GCGGAATGCC GCCCGCCGCG TGGCCGGGCG CGGGCGGGAT GGCCGCGCGG CTGCACGTGG CCGAAGCCAC GCTGCGCCGC AAGCTGCATC AGGAAGGCCA CGCGTACCAG TCGATCAAGG ACACGCTAAG GCGCGATCTC GCGTTCGAGG CGCTGGCCGA CCCGGCCCGC ACGATCGCCG ACGTCGCGGC CGCGACCGGT TTCGCGGAGC CGAGCGCGTT CTACCGCGCG TTTCGCAAGT GGAGCGGGCG CAGCCCGGCC GAGTTTCGGG AAGAAGCGCT CGCGCGCGGC GGCGGCGCCG GCTGA
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Protein sequence | MKQEDKGTVA ISLVAHSVSL ATRRGVAAEP LLAQAGIAPA LLAQPRARVS AQQYGALWNA IARTLDDEFF GQDRHPMRSG SFIAMSQAAL SARDGLHAMA RAVNFMHCVL DDLHAELDAN PQRVRLRFVH RNNGATPAMF TYATYFIIVY GLTCWLIGRR IPLLHASFRC DTPPADHEYP SMFCDDMRFN EPDSYVDFDP EFATLPVVQN AKTLKTFLRN APASFIVKYR NPNALAQRVR AVLRGMPPAA WPGAGGMAAR LHVAEATLRR KLHQEGHAYQ SIKDTLRRDL AFEALADPAR TIADVAAATG FAEPSAFYRA FRKWSGRSPA EFREEALARG GGAG
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