| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5308 |
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| Symbol | |
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| ID | 6128118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 2419661 |
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| End bp | 2421565 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641652398 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001778925 |
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| Protein GI | 170737665 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0711362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAAC CCTACGTGCT GCCCGCCACC ACGGGTCGCA CCGACCTGCT CGCGCAGGCG
CATGCGCGTT CGACCGCGGT CGGCCTGCGC GCGCACGAAC GCCCCGATTT CTCGCCGCTG
TCGCGCATCG CGCTGCGCGA ACTGCTCGAC ACGAACCACA CGCTGTTCTC GCACGCCCGC
CCGGTGATGG AGGACCTCCA CGCGCAGATC GCCGAGACGC AAAGCCTCGT GCTGCTGACG
GACGCCGACG GCGTGATCCT GCACAGCATC GGCGACGCGG ACTTCATCGA GAAAGCCAAC
CGCGTCGCGC TGTGCAACGG CGTGTCGTGG GCCGAGGGCG CGCGCGGCAC CAACGCGATC
GGCACCGCGC TCGCATCGGG CCAGGCCGTG GTCGTGCACG GTGCCGAACA TTTCCTGCGC
GCGAACCACA TCCTCACCTG CGCGTGCGCG CCGATCGTCG ATCCGTTCGG CCGCACGCTC
GGCACGCTCG ACGTGAGCGG CGACCCGCGC GGCGCCAGCC CGCATACGCT CGCGCTCGTG
CGGATGTCGG CGCAACTGAT CGAGAACCAC CTGTTCGCGA ACCAGTGCGG CGAAGCGCTG
CGGCTGCGCT TTCACGCCCA CGAGGATTGC GTCGATTCGC TGTTCGCCGG GCTCGTCGCG
TTCGGCCCCG ACGGCGGGCT GATCGCCGCG AACCGCAGCG CCCAATTCCA GCTCGGCGCA
TCGTTCGACG CACTGCAGCA TCAGGCGAGC GACGCGTTGT TCGGCATGCG CTTCGCCCAG
CTCGCGCAGC AGGCCGCGCG CGCACCGGGC GCCACGTTCC GCCTTACGCT GTCGACCGGC
GTGCGCGTGC TCGCGCGCTG CGAATTCCCG GAAGCGCAGA AAACGACCGT CGCGGTCACG
CCGCCTGCAC CGGCCGCACG CGTGCGTGCG CCGGACCCCG ACGCGATCAC GTTCGCGACG
CTCGACACCG GCGACGCGCG CATGGCCGCC GTGCTCGAAC GCGTCGCGAA GATCCGCGGG
CGCGACCTGC CGCTGCTGAT TCTCGGCCAG ACCGGCACCG GCAAGGAATG GCTCGCCCGC
GCGCTGCACC AGGCGTCGCC GCGCGCGGAT GGCCCGTTTG TCGCGGTCAA CTGCGCGGCG
CTGCCCGATT CGCTGATCGA GGCCGAGCTG TTCGGCTATG AAGACGGCGC GTTCACGGGC
GCACGCAAGC GCGGCAGCCC CGGCAAGATT GCGCAGGCCG ACGGCGGCAC GCTGTTTCTC
GATGAAATCG GCGACATGCC GCTCGCGCAG CAGGTGCGGC TGATGCGCGT GCTGCAGGAG
CGCGCGGTGA TGCCGCTCGG CGGCGCACGC GCGGTGCCGG TCGACGTGCG GGTGGTCTGC
GCGACCCACC GCGACCTGCG CGCGATGATC GCGGAGGGCA CGTTCCGCGA GGATCTGTTC
TACCGGATCA ACGGGCTCGC GGTCACGCTG CCGGCGCTTG CCGCCCGCAC CGACCTGCCG
GCGCTCGTCG AGCGCATCCT TGCGCGGCTA TCGCGCAGCG AGCCGATGCC GCGCCGTCTG
GCGGCCGACG TGCTCGATGC ATTCGCGCGC CACCGCTGGC CCGGCAACCT GCGGCAGATG
ACCAACGTGC TGCGCACGGC CGGCATGCTC GCCGAAGACG AAGCCGAAAT CACGCTCGCG
CATTTGCCCG ACGATTTCTG GCTCGACTGC GACGATGCGC CGGCGGCCGA CACGCCAGCC
GTATCGCCCG CGTCGCCCGG CAGGCGCGAA GGCACGACGC TGCAAAGCCA TCAGGCCGCG
ATGATCGACG CGGTGCTCGC GCGGCACGGC GGCAACGTAT CGGCGGCCGC GCGCGAGCTC
GGCCTCGCCC GCAATACCGT GTACCGCTAT CTGCGGCGGC ACTGA
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| Protein sequence | MPQPYVLPAT TGRTDLLAQA HARSTAVGLR AHERPDFSPL SRIALRELLD TNHTLFSHAR
PVMEDLHAQI AETQSLVLLT DADGVILHSI GDADFIEKAN RVALCNGVSW AEGARGTNAI
GTALASGQAV VVHGAEHFLR ANHILTCACA PIVDPFGRTL GTLDVSGDPR GASPHTLALV
RMSAQLIENH LFANQCGEAL RLRFHAHEDC VDSLFAGLVA FGPDGGLIAA NRSAQFQLGA
SFDALQHQAS DALFGMRFAQ LAQQAARAPG ATFRLTLSTG VRVLARCEFP EAQKTTVAVT
PPAPAARVRA PDPDAITFAT LDTGDARMAA VLERVAKIRG RDLPLLILGQ TGTGKEWLAR
ALHQASPRAD GPFVAVNCAA LPDSLIEAEL FGYEDGAFTG ARKRGSPGKI AQADGGTLFL
DEIGDMPLAQ QVRLMRVLQE RAVMPLGGAR AVPVDVRVVC ATHRDLRAMI AEGTFREDLF
YRINGLAVTL PALAARTDLP ALVERILARL SRSEPMPRRL AADVLDAFAR HRWPGNLRQM
TNVLRTAGML AEDEAEITLA HLPDDFWLDC DDAPAADTPA VSPASPGRRE GTTLQSHQAA
MIDAVLARHG GNVSAAAREL GLARNTVYRY LRRH
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