Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5287 |
Symbol | |
ID | 6128097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 2389477 |
End bp | 2391129 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641652376 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001778904 |
Protein GI | 170737644 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1021] Peptide arylation enzymes |
TIGRFAM ID | [TIGR02275] 2,3-dihydroxybenzoate-AMP ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0153885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAATCCT CCCCTTCCTC CCTGGCGGCG GCCGTGCCGG CCGACGCGCC CGACTGGCCC GACGACTTCG CGCGCCGCTA CCGCGACGCC GGCTACTGGC AGGACACGAC GTTCTTCGAC GCGCTCGATG CCTGCGCGCA GCGCCATCCC GACGCGCTCG CCGTCGTCGA CGGCACGCTG CGGCTGCGCT ATCGCGATCT GCTCGCGCGC ATTCGCCGCC TCGCGGGCGG CCTCGCGCGC CTCGGCCTGG TACGCGGCGA CGCAGTCGTC GTCCAGTTGC CGAACGGCGC GCGTTTCATC GAGACGTGCT TCGCGCTGTT CCAGCTCGGC GTGCGGCCGG TGCTCGCGCT GCCCGCGCAC CGTCACTACG AGATCGGCGC GTTCTGCCGC TTCGCCGGTG CGCGTGCCTA TCTCGGCGCG TCGCAGCTCG GCGATTTCGA CTGCCGGCCG CTCGCGGCCG CGTTGCAGGC CGACTGCCCG ACGCTCGAGC ACATCGTGAT GGCCGGCGAC GATCACGCGT TCACGTCGTT CGACGCGCTG TACGACGCGC CGCCCGTGCT CGACTGCTCG GCACACGCCG ACGACATCGC GTGCTTCCAG CTGTCGGGCG GCACGACCGG CACGCCGAAA CTGATTCCGC GCCGCCATCG CGAATACCTG TACAACGTGC GCGCCTGCAG CGCCGCGAGC GGTTTCGATG CCGACACCGT CTATCTCGCC GCGCTGCCGA TGGCGCACAA CTTCACGCTG TGCTGCCCCG GCACGATCGG CGCATTGCTC GCGGGCGGCC GGGTGGTAAC GACCGCGCGG CCCGAGCCCG ACCAGAGCTT CGCGCTGATC GCGCAGGAAC GCGTTACGCA CACCGCGCTC GTGCCGCCGC TCGCGCTGCT GTGGCTCGAC GAGCAGCCGC AACGGCAGGC CGACCTGTCG AGCCTGCGCG TGCTGCAGGT CGGCGGCGCA CGGCTGATGG ACCACGCGGC CGAACGCGTG ACGCCCGTGC TCGGCTGCCG GCTGCAGCAG GTGTTCGGCA TGGCCGAAGG GCTCATCTGC TGCACGCGGC TCGACGATGC GCCCGAGCGC ATCGCGCACA CACAGGGCCG CCCCGTTTCC GAAGGCGACG AAGTGCGCAT CGTCGACGAA AGCGGCGCAC CGGCCGCGGC CGGCGAGATC GGCGAATTGC AGGTACGCGG CCCGTACACG ATCCGCGGCT ACTACCGGCT CGCGGAGCAC GACGCGACGG CATTCACGGC CGACGGCTTC TACCGCAGCG GCGACCGCGT GCGGCGCACC GCGGACGGCG ACCTCGTCGT CGAAGGCCGC GACAAGGATC AGATCAACCG CGGCGGCGAG AAGGTCTCCG CCGAGGAAGT GGAGAACCTG TTGCTCGCGC ATCCGCAGGT GCACGATGCG GCGGTCGTCG CGATGCCCGA CCCGATCCTC GGCGAGCGAA CCTGCGCGTT CGTGGTCGCA CGCGCGCCGG CCCCGTCCAG GCTCGTGCTG AAACGCTACC TGCGCGACCG CGGGCTCGCG GCGTTCAAAA TCCCCGACCG CATCGAATTC ATGCCGCGCT TTCCGGAAAC CGGCATCGGC AAGACCAGCA AGAAATCGCT GCGCGACCTG CTGCGCCGCC AGTTGCAGGC GGCGGCCGCA TGA
|
Protein sequence | MQSSPSSLAA AVPADAPDWP DDFARRYRDA GYWQDTTFFD ALDACAQRHP DALAVVDGTL RLRYRDLLAR IRRLAGGLAR LGLVRGDAVV VQLPNGARFI ETCFALFQLG VRPVLALPAH RHYEIGAFCR FAGARAYLGA SQLGDFDCRP LAAALQADCP TLEHIVMAGD DHAFTSFDAL YDAPPVLDCS AHADDIACFQ LSGGTTGTPK LIPRRHREYL YNVRACSAAS GFDADTVYLA ALPMAHNFTL CCPGTIGALL AGGRVVTTAR PEPDQSFALI AQERVTHTAL VPPLALLWLD EQPQRQADLS SLRVLQVGGA RLMDHAAERV TPVLGCRLQQ VFGMAEGLIC CTRLDDAPER IAHTQGRPVS EGDEVRIVDE SGAPAAAGEI GELQVRGPYT IRGYYRLAEH DATAFTADGF YRSGDRVRRT ADGDLVVEGR DKDQINRGGE KVSAEEVENL LLAHPQVHDA AVVAMPDPIL GERTCAFVVA RAPAPSRLVL KRYLRDRGLA AFKIPDRIEF MPRFPETGIG KTSKKSLRDL LRRQLQAAAA
|
| |