Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5281 |
Symbol | |
ID | 6128091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 2383874 |
End bp | 2384623 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641652370 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001778898 |
Protein GI | 170737638 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.564594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGACCG TACTGATTAC CGGCTGTTCC TCCGGCTTCG GCCTCGAAAT CGCGCGCCAT TTCCTGGCGC GCGACTGGCA GGTCGTCGCG ACGATGCGCA AGCCGAACGA CGACGTGCTG CCGCCGTCGG AGCGCTTGCG CGTGCTGCCG CTGGACGTGA CGAACGCGGA CAGCATTCGC GCCGCGATCG ACGCCGCCGG CCCGATCGAC GTGCTCGTCA ACAACGCGGG CTTCGGCGCG GCCGCACCGG CCGAACTCAT GCCGCTCGAC ACCGTGCGCG CGCTGTTCGA CACCAACACG ATCGGCACGA TCGCGGTGAC GCAGGCCGTG CTGCCGCAGT TTCGCGCGCG CGGGGCCGGC GTGGTCGTGA ACGTCACGTC GAGCGTTACG CTGAAAGCGC TGCCGCTGGT CAGCGCGTAT CGCGCGAGCA AGGCGGCAGT CAATGCCTAT ACCGAATCGA TGGCGGCCGA GCTCGAACCG TTCGGCGTGC GCGCGCATCT CGTGCTGCCG GGCCGCGCGC CCGACACGCG TTTCTCCGAC AATGCACGAG CCAACATGCA CGGCTTCGAG CACGAAGCGT ATGCGGATTT CGTCGGCAAG GCCGTCGCGC GGATGCTCGA TGCGTCGGGG CCGATCACCC ATGCGCAGGA CGTCGCCGAA GCCGTGTGGC GCGCGGCGAC CGATCCGTCG AGCCCGATGC GGATGCCGGC CGGCGCCGAT GCGCAGGCGT GGGCAGCGGA AGCGGGTTGA
|
Protein sequence | MKTVLITGCS SGFGLEIARH FLARDWQVVA TMRKPNDDVL PPSERLRVLP LDVTNADSIR AAIDAAGPID VLVNNAGFGA AAPAELMPLD TVRALFDTNT IGTIAVTQAV LPQFRARGAG VVVNVTSSVT LKALPLVSAY RASKAAVNAY TESMAAELEP FGVRAHLVLP GRAPDTRFSD NARANMHGFE HEAYADFVGK AVARMLDASG PITHAQDVAE AVWRAATDPS SPMRMPAGAD AQAWAAEAG
|
| |