| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5280 |
|---|
| Symbol | |
|---|
| ID | 6128090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 2382855 |
|---|
| End bp | 2383772 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641652369 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001778897 |
|---|
| Protein GI | 170737637 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.910974 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACC CGCTGACCGA AGTCGTGACG CTGCTGCAAC CGGGCGCGCG GTACTCGAAG
TACGTCCGTG GCGCGAGCCC GTGGGCGATC AGCCGCACGG TCGCCGGCGA GCCGTTCTAT
TGCGCGGTCC TCGACGGCGG CTGCCGGATC GCGATCGACG GGCACGCGCC GATCGAGCTG
CTGGCCGGCG ATTTCATGCT GATTCCGGCG GCCTACGGCG TGGCGATGTC GAGCCTCGAA
CCACCGCCGC CGGGCGTCGA CACCGCGCCG CCCGTCATGC TCGACCACGG CGAATACCGG
ATCGGCGATC CGGCCAATCC AGTCGACACG CGAATGATGG CCGGCAACTG CAGCTTCGGT
TCGCCCGACG CGGCGCTGCT GGTGTCGCTG CTGCCGCGCT TCGTGCACGT ACGCGGCGAG
CCGCGGCTGA CCACGCTCGT GCAACTGGTG CGCGACGAAT CGCGCGCGCA GCGGCCGGCC
CGCGAAATCG TGCTGGCGCG CCTGCTGGAA GTGCTGCTGA TCGAGGCGAT GCGGTTCACG
ACCGGCACGC ATGCATCGCC CGGCCTCGTG CGCGGGCTCG CCGACAGCCG CCTCGCGGCC
GCGCTGCGCC GGATGCACGA ACGCCCCGCG CACCCGTGGA CGATCGTCGA ACTCGCGAAG
GAAGCCGCGC TGTCGCGCTC GACGTTCTTC GAACGCTTCA GCCGCGCGGT CGGCGTCGCG
CCGATGGAGT ACCTGCTGAC ATGGCGCATG GCGCTCGCGA AGGATCTGCT CCGCCGCAAC
GAAGGGCGCA TCGCGGAGAT CGCGGCGCGC GTCGGCTACA GCTCGGCGAG CACCTTCAGC
GTCGCGTTCG CGCGGCACGT CGGCCGGCCG CCCGCGCAAT ATGCGCGCGA CGAACAAGCG
ACGGTGAGCG AATCATGA
|
|---|
| Protein sequence | MIDPLTEVVT LLQPGARYSK YVRGASPWAI SRTVAGEPFY CAVLDGGCRI AIDGHAPIEL
LAGDFMLIPA AYGVAMSSLE PPPPGVDTAP PVMLDHGEYR IGDPANPVDT RMMAGNCSFG
SPDAALLVSL LPRFVHVRGE PRLTTLVQLV RDESRAQRPA REIVLARLLE VLLIEAMRFT
TGTHASPGLV RGLADSRLAA ALRRMHERPA HPWTIVELAK EAALSRSTFF ERFSRAVGVA
PMEYLLTWRM ALAKDLLRRN EGRIAEIAAR VGYSSASTFS VAFARHVGRP PAQYARDEQA
TVSES
|
|---|
| |