| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5251 |
|---|
| Symbol | |
|---|
| ID | 6128062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 2350410 |
|---|
| End bp | 2351651 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641652342 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_001778870 |
|---|
| Protein GI | 170737610 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTCG ACGTCATCGT TCTCGGCGCC GGCATCGTCG GCGTCTCCGC CGCGCTGCAC
CTGCAGGATC GCGGCCGCAA GGTCGCCCTC GTCGATCGCG GCGCGCCCGG CGAAGGCACG
AGCTTCGGCA ATGCCGGGCT GATCGAGCGC TCGTCGGTCG AACCGTATCC GTTCCCGCGC
AGCCCGTTCA CGCTGATGCG CTATGCGCTG AACCGCTCCA CCGATCTCTA CTGGCACAGC
GCGTCGCTGC CCGCGTTCGC GCCGTGGCTC GCACGGTTCT GGTGGGAATC GGCGCCGCTG
CGTCACGCGG CAGCCTCGCG CGACATGCTT CCGCTGATCG AACGCTGCAT CGTCGAACAC
GATGCGCTGA TCGCGCGGGC CGGCGCCGGC GAACTGGTCC GCGCCAGTGG CTGGCTGGAA
GCGTTCCGCA CGCCGGCCGC ATTCGAACGC GGCGTGGCCG AGGCCGGCCT CACCGCGCGC
CGCCACGGGC TCGGCATCAC GCCGCTCGAT GCGGCCGCGC TGCGCGCGCA CGAACCGAGC
CTCGCACCGG GCTTCTGTGG CGCGCTGCAC TGGCTCGACC CGAAAAGCGT CGTCGATCCG
GCCGCGCTCG TCAAAGCGTA TGCGCACCTG TTCGTGCAGG GCGGCGGCAC GCTGCTGACC
GGCGACGCCG CGAGCCTCGA CGCGCTGTCG CCCGGCTGGC AGGTGCGCAC CGACGACGGC
CCGGCGGCCG CGCCGGCCGT CGTCGTCGCG CTCGGCCCGT GGTCCGACAC GGTATTCGGC
AAGTTCGGCT ACAAGATCCC GCTGCGCGAG AAGCGCGGCT ACCACATGCA CTACGCGCCG
TCCGCGCGCG GCGTGCCGTC GGCGCCGATC GTCGATCGCG AATACGGTTA TGTGATCGCG
CCGATGCGGC GCGGGCTGCG GCTGACGACC GGCGTCGAGA TCGCGCGGCG CGGGCTTCCG
CCAACGGGCG TGCAGCTCGA ACGCGCGGAA CGCGTCGCGC GGCCGGTGTT CGGTTTCGGC
GAGCGGCTCG ACCCGCATCC GTGGCTCGGC TTCCGGCCGT GCACGCCCGA CATGCGCCCG
GTGATCGGCC CCGCACCCGC GCATCGCGGG CTGTGGTTCG CGTTCGGGCA CAACCATCAC
GGGCTGACGC TCGGCCCGGT CAGCGGCCGG CTGCTGGCCG AGATGATGAC CGGCGAGGCG
CCGTTCACCG ACCCGGCACC GTATCGCGCG GACCGCTTCT GA
|
|---|
| Protein sequence | MDFDVIVLGA GIVGVSAALH LQDRGRKVAL VDRGAPGEGT SFGNAGLIER SSVEPYPFPR
SPFTLMRYAL NRSTDLYWHS ASLPAFAPWL ARFWWESAPL RHAAASRDML PLIERCIVEH
DALIARAGAG ELVRASGWLE AFRTPAAFER GVAEAGLTAR RHGLGITPLD AAALRAHEPS
LAPGFCGALH WLDPKSVVDP AALVKAYAHL FVQGGGTLLT GDAASLDALS PGWQVRTDDG
PAAAPAVVVA LGPWSDTVFG KFGYKIPLRE KRGYHMHYAP SARGVPSAPI VDREYGYVIA
PMRRGLRLTT GVEIARRGLP PTGVQLERAE RVARPVFGFG ERLDPHPWLG FRPCTPDMRP
VIGPAPAHRG LWFAFGHNHH GLTLGPVSGR LLAEMMTGEA PFTDPAPYRA DRF
|
|---|
| |