| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5249 |
|---|
| Symbol | |
|---|
| ID | 6128060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 2348262 |
|---|
| End bp | 2349029 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641652340 |
|---|
| Product | regulatory protein GntR HTH |
|---|
| Protein accession | YP_001778868 |
|---|
| Protein GI | 170737608 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATCC AGCCGATTCA GAACCGCCGC CTCTACCAGC AGATCGCCGA CAAGCTCAGT
GCGATGATCG AGTCCGGCGA TTTCCCGCCG GGCAGCTATC TGCCGCCCGA GCGCGAACTC
GCCGAACGGT TCGGCGTGTC GCGCACGTCG GTGCGCGAGG CGCTGATCGC GCTCGAAGTG
AACGGACTCG TCAGCGTGCG CGTCGGCGAC GGCGTGAAGG TGCGCCATCC CGAAGCGGCC
GCGGCGCCCG AACCCGCGCC GGCTCCCGAC GCGACGGTCG CGCCGTTCTC GATCGTCGAG
ATCGATCCCG AGCTCGGCAT CGCGCTCGAT CTCGACACCG AAATCCCGCC GTTCGCGCTG
CTGCAGGCGC GCCGGCTGAT CGAGCCGGAA GCCGCGTCGC TGGCCGCGAA GCATGGCTCG
GACGCGCAGA TCGAAGGCAT CCACGAAGCG TTCCTGCGCA ACCAGGACGA CAACCGCAGC
GGCTCGCTCA CGCACCCGGG CGACCGGCTG TTCCATATCC GCATCGCGGA GGCGAGCGAC
AACGCCGCGT ATGCGCTGAT GATCAAGCAG TTGCTCGCGC ACAAGTACGA CCTGATGTTC
CAGCGGCTGC AGTCGCTGTA CATGCCGAAC GACATGCCGC ACCGGTCGGA GCTCGAGCAT
CGCGCGATCC TCGATGCGAT CCGTGCGCGC GATCCCGACG CCGCGCGCCG TGCGATGGCC
GAGCATCTCG ATGAAGTGAT TCGCATCTTC GGCCGCGCGC TCGACTGA
|
|---|
| Protein sequence | MSIQPIQNRR LYQQIADKLS AMIESGDFPP GSYLPPEREL AERFGVSRTS VREALIALEV
NGLVSVRVGD GVKVRHPEAA AAPEPAPAPD ATVAPFSIVE IDPELGIALD LDTEIPPFAL
LQARRLIEPE AASLAAKHGS DAQIEGIHEA FLRNQDDNRS GSLTHPGDRL FHIRIAEASD
NAAYALMIKQ LLAHKYDLMF QRLQSLYMPN DMPHRSELEH RAILDAIRAR DPDAARRAMA
EHLDEVIRIF GRALD
|
|---|
| |