Gene Bcenmc03_5234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5234 
Symbol 
ID6128045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2333222 
End bp2334187 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content69% 
IMG OID641652325 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_001778853 
Protein GI170737593 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTGA AGACCGACAT CAAGACGTTT GCCGCCATCG GCACCGGCGT GATCGGCAGC 
GGATGGATTT CCCGCGCGCT CGCGCACGGT CTCGACGTGG TCGTGTGGGA CCCGGCGCCG
GGCGCCGAAG CGCGACTGCG CGCGAACGTC GCGAACGCAT GGCCCGCGCT CGAACGCGTC
GGCCTCGCGC CGGGCGCCGA TCCCGCGCGG CTGCGCTTCG TATCGACGAT CGAGGCATGC
GTCGCCGATG CGGATTTCAT CCAGGAGAGC GCGCCCGAGC GCGAGGCGCT GAAGCTCGAA
CTGCACGAGC AGATCAGCCG CGCGGCGAAG CCCGACGCGA TCATCGCGTC GTCGACGTCG
GGGCTGCTGC CGACCGATTT CTACGCGCGG GCCACGCATC CGGAGCGCTG CGTGGTCGGT
CACCCGTTCA ATCCCGTCTA TCTGCTGCCG CTCGTCGAGG TGCTCGGCGG CGCGCGCACG
TCGCCGGAAG CGGTCGAGGG CGCGATGGAG GTCTATCGCA AGCTCGGCAT GCGGCCGCTG
CACGTGCGCA AGGAAGTGCC GGGCTTCATC GCGGACCGCC TGCTCGAGGC GTTGTGGCGC
GAGGCGCTGC ATCTGGTCAA CGAAGGCGTC GCGACGACCG GCGAGATCGA CGATGCGATC
CGCTTCGGCG CGGGCATCCG CTGGTCGTTC ATGGGCACGT TCCTGACCTA CACGCTGGCC
GGCGGCGACG CGGGCATGCG ACACTTCATG CAGCAATTCG GCCCCGCGCT CGAATTGCCG
TGGACGAAGC TGGTCGCGCC GACGCTCACC GACGCGCTGA TCGACAGCGT CGTCGAAGGC
ACGACCGAAC AGCAGGGCAC GCGCAGCATC AAGGAGCTCG AACGCTATCG CGACGAGTGC
ATCACCGAGG TGCTGAAATC GATCGCCGCG GTGAAGGCGC GGCACGGGAT GCGATTCGAG
GACTAA
 
Protein sequence
MAVKTDIKTF AAIGTGVIGS GWISRALAHG LDVVVWDPAP GAEARLRANV ANAWPALERV 
GLAPGADPAR LRFVSTIEAC VADADFIQES APEREALKLE LHEQISRAAK PDAIIASSTS
GLLPTDFYAR ATHPERCVVG HPFNPVYLLP LVEVLGGART SPEAVEGAME VYRKLGMRPL
HVRKEVPGFI ADRLLEALWR EALHLVNEGV ATTGEIDDAI RFGAGIRWSF MGTFLTYTLA
GGDAGMRHFM QQFGPALELP WTKLVAPTLT DALIDSVVEG TTEQQGTRSI KELERYRDEC
ITEVLKSIAA VKARHGMRFE D