Gene Bcenmc03_5216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5216 
Symbol 
ID6128027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2315973 
End bp2317223 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content71% 
IMG OID641652307 
Productmajor facilitator transporter 
Protein accessionYP_001778835 
Protein GI170737575 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC CCGTGCCCGA TTCCAGTCCG TTATCCCCGT TACCCGCCAA CCTGTTTCGC 
CACGCGCCGT TCCAGCGTTT CTGGGGCGCG CGCGTGATGT CGTCGCTGGC CTTCCAGATC
CTGTCGGTCG CGATCGGCTG GTACGTGTAT GCGCTCACGC ACAGCGCGTT CGCACTCGGT
CTCGTCGGCC TCGCGCAGTT CGTGCCGATG TTCGCGCTGA CGCTCGTCGT CGGGCAGGTG
GCCGACCGCT ACGACCGCCG GCGCATCGCG ACGATCTGCC AGAGCGTCGA GGCATTGGCC
GCCGGCGTGT TCCTGCTCGG CGCGGTGCAA GGGTGGCTGG CCGCGCCGGC CGTGTATGCG
CTCGCGGCGA TCGTCGGCAC GGCGCGTGCA TTCGAGTCGC CGTCGGTGTC GTCGCTGTTG
CCGGCCGTCG TGCCGCGCAC CGACCTGCCG CGCGCGACCG CGCTGTCGAC GTCGGCGAAC
CAGGCCGCGC AGATCCTCGG GCCCGCGTTC GGCGGGTTGC TCTATGGTGT CGGCGCACCC
GTAGCGTTCG GCACGAGCGT CGCGGCATTC GCGGTCGCGG CGATGCTGAG CGGCACGATT
CCGCTGCGCA GCGCGCCGCC CGCGCGCGAG CCGGTCACGC TGCGCTCGGT GTTTTCGGGT
ATCGCGTTCA TCCGGCGCGA GCCGGCGATT CTCGGTGCGC TGTCGCTCGA CCTGTTCGCG
GTGCTGTTCG GCGGCGCGAC CGCGCTGTTG CCGATCTATG CGCGCGACAT CCTTCAGGTC
GGCCCGTGGG GACTCGGGGC GCTGCGCGCG GCGCCGGCGG TCGGCGCACT CGCGGGCACG
CTGTGGCTCA CGCGTTTTCC ATTGAAGGGG CGGCCGGGCC GCGCGATGTT CGGCGGCGTG
ATCGCGTTCG GCATCGCGAC GATCGTGTTC GGGTTGTCGC GGCACTTCGC GTTGTCGCTC
GTGGCGCTGG CCGCGCTCGG CGCATCGGAC GTGATCAGCG TCGTCGTGCG CCTGTCGCTC
GTGCAGCTGC GTACGCCCGA CGACATGCTC GGCCGCGTGA GCGCGGTCAA CTCGCTGTTC
ATCGGCACGT CGAACCAGCT CGGCGAATTC GAATCGGGCG TGACGGCTGC GTGGTGGGGC
GCGCCGGCCG CGATCGTCGT CGGCGGCGCG GCGACGATCG CCGTCGCGCT GGCGTGGATG
CGGCTCTTTC CGCAGCTCAC GAACATGAAG TCGCTCGAAC GCGACGCGTG A
 
Protein sequence
MTTPVPDSSP LSPLPANLFR HAPFQRFWGA RVMSSLAFQI LSVAIGWYVY ALTHSAFALG 
LVGLAQFVPM FALTLVVGQV ADRYDRRRIA TICQSVEALA AGVFLLGAVQ GWLAAPAVYA
LAAIVGTARA FESPSVSSLL PAVVPRTDLP RATALSTSAN QAAQILGPAF GGLLYGVGAP
VAFGTSVAAF AVAAMLSGTI PLRSAPPARE PVTLRSVFSG IAFIRREPAI LGALSLDLFA
VLFGGATALL PIYARDILQV GPWGLGALRA APAVGALAGT LWLTRFPLKG RPGRAMFGGV
IAFGIATIVF GLSRHFALSL VALAALGASD VISVVVRLSL VQLRTPDDML GRVSAVNSLF
IGTSNQLGEF ESGVTAAWWG APAAIVVGGA ATIAVALAWM RLFPQLTNMK SLERDA